RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 AADACL4Q5VUY2 407 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TPGS2Q68CL5 300 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TANGO2Q6ICL3 276 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR7E24Q6IFN5 339 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CES5AQ6NT32 575 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NEPROQ6NW34 567 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SYT10Q6XYQ8 523 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NANOGNBQ7Z5D8 188 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 DSG4Q86SJ6 1040 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TADA2BQ86TJ2 420 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SATL1Q86VE3 508 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 C10orf67Q8IYJ2 551 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CIARTQ8N365 385 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NKAPQ8N5F7 415 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 DNAAF3Q8N9W5 541 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SPATA5Q8NB90 893 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 BBOF1Q8ND07 529 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF397Q8NF99 534 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ENKURQ8TC29 256 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC26A7Q8TE54 656 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NOC3LQ8WTT2 800 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RUFY2Q8WXA3 655 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 HSPH1Q92598 858 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 HDAC2Q92769 488 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 KIFAP3Q92845 792 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GTF3C6Q969F1 213 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SNX21Q969T3 373 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 INTS12Q96CB8 462 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF501Q96CX3 271 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 KTI12Q96EK9 354 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 C19orf60Q96EN9 201 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RBM41Q96IZ5 413 aaKnown RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 C7orf34Q96L11 122 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 F2RL3Q96RI0 385 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 EGFL8Q99944 293 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TREX2Q9BQ50 279 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SDF4Q9BRK5 362 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 HAUS8Q9BT25 410 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 EDEM3Q9BZQ6 932 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 EHD1Q9H4M9 534 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZSCAN16Q9H4T2 348 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TAF1DQ9H5J8 278 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 DENND2DQ9H6A0 471 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 HAUS4Q9H6D7 363 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 UCK1Q9HA47 277 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 TMEM165Q9HC07 324 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 POLE3Q9NRF9 147 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NSMCE4AQ9NXX6 385 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF624Q9P2J8 865 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SUCLA2Q9P2R7 463 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDRG3Q9UGV2 375 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RASAL2Q9UJF2 1139 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 GJD2Q9UKL4 321 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 KCNS2Q9ULS6 477 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 CLEC4AQ9UMR7 237 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRCH1Q9Y2L9 728 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 SESN1Q9Y6P5 492 aa2□□□□□ -2.09
HMGB3P17-201ENST00000504195 RSF1Q96T23 1441 aaPredicted RBP2□□□□□ -2.09
HMGB3P17-201ENST00000504195 EIF3AQ14152 1382 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARHGAP10A1A4S6 786 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ASPDHA6ND91 283 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRIQ4A6NIV6 560 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRC72A6NJI9 287 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRIQ3A6PVS8 624 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 F5H0A9 414 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 GOLGA8SH3BPF8 625 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SOCS6O14544 535 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MAPK13O15264 365 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 NOL3O60936 208 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDUFS7O75251 213 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 GUCY1B2O75343 617 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CRTAPO75718 401 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MBD4O95243 580 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 TGDSO95455 350 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CD4P01730 458 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 MT-ND3P03897 115 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 S100A9P06702 114 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CSF1P09603 554 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 UBTFL6P0CB48 400 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRKAR1AP10644 381 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 TOP1P11387 765 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 UBL4AP11441 157 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ACTN1P12814 892 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CDH1P12830 882 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CPA3P15088 417 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CSF2RAP15509 400 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF8P17098 575 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CD58P19256 250 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 RXRAP19793 462 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 M6PRP20645 277 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 IL32P24001 234 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 SERPINB3P29508 390 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 ALDH4A1P30038 563 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 HNRNPH1P31943 449 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CA8P35219 290 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 CHKAP35790 457 aa1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 PSMC2P35998 433 aaKnown RBP1.99□□□□□ -2.09
HMGB3P17-201ENST00000504195 RANBP1P43487 201 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms