RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TPH1P17752 444 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 CCR10P46092 362 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 CAPZBP47756 277 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 XIAPP98170 497 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 P3H1Q32P28 736 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 DENND5AQ6IQ26 1287 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 C6orf15Q6UXA7 325 aaPredicted RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 TAS2R42Q7RTR8 314 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 TIPARPQ7Z3E1 657 aaKnown RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 PRSS42Q7Z5A4 293 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 PTRH1Q86Y79 214 aaKnown RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 UBXN4Q92575 508 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 RSC1A1Q92681 617 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 ELMO2Q96JJ3 720 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 SLC45A3Q96JT2 553 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 LINC00615Q96LM1 132 aaPredicted RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 C12orf66Q96MD2 445 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 COPS8Q99627 209 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 WWP1Q9H0M0 922 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 LRRC40Q9H9A6 602 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 IMP3Q9NV31 184 aaKnown RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 PADI1Q9ULC6 663 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 PACSIN2Q9UNF0 486 aaPredicted RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 HEBP2Q9Y5Z4 205 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 COL12A1Q99715 3063 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 PTPN13Q12923 2485 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 LOC101059948A0A1B0GTJ6 334 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 C17orf113A0A1B0GUU1 675 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 NKX2-8O15522 239 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 LDB2O43679 373 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 METTL18O95568 372 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 GAS8O95995 478 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 SLC35G4P0C7Q5 338 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 MTHFD1P11586 935 aaKnown RBP11.68□□□□□ -0.54
MED28-203ENST00000503945 NELFEP18615 380 aaKnown RBP11.68□□□□□ -0.54
MED28-203ENST00000503945 NDUFS1P28331 727 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 SH3BP2P78314 561 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 TLE1Q04724 770 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 MAP7Q14244 749 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 SKIDA1Q1XH10 827 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 BCL7AQ4VC05 210 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 ZRANB3Q5FWF4 1079 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 LINC00523Q86TU6 105 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 PPP1R3BQ86XI6 285 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 NXPE1Q8N323 547 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 SIDT2Q8NBJ9 832 aaKnown RBP11.68□□□□□ -0.54
MED28-203ENST00000503945 OR13C4Q8NGS5 318 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 CDKN2AIPNLQ96HQ2 116 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 HES6Q96HZ4 224 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 DESI2Q9BSY9 194 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 TMEM121Q9BTD3 319 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 VPS37BQ9H9H4 285 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 FAM8A1Q9UBU6 413 aa11.68□□□□□ -0.54
MED28-203ENST00000503945 CFAP20Q9Y6A4 193 aaKnown RBP11.68□□□□□ -0.54
MED28-203ENST00000503945 DDX3YO15523 660 aaKnown RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 MAP3K7O43318 606 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 KRT86O43790 486 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 SPAG6O75602 509 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 MT-ND3P03897 115 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 FGF5P12034 268 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 TCN2P20062 427 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 CDC25BP30305 580 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 MC4RP32245 332 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 LMAN1P49257 510 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 HSD11B2P80365 405 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 ACY1Q03154 408 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 PRKAA1Q13131 559 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 KLF1Q13351 362 aaPredicted RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 LAMB3Q13751 1172 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.67□□□□□ -0.54
MED28-203ENST00000503945 DNTTIP2Q5QJE6 756 aaKnown RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 TMTC4Q5T4D3 741 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 KCTD11Q693B1 232 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 OOSP2Q86WS3 158 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 KMT5CQ86Y97 462 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 TMEM139Q8IV31 216 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 OR4E2Q8NGC2 313 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 SLC35B2Q8TB61 432 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 STYXQ8WUJ0 223 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 STAMBPL1Q96FJ0 436 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 FCRL4Q96PJ5 515 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 FERD3LQ96RJ6 166 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 CD180Q99467 661 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 FRMD8P1Q9BZ68 369 aaPredicted RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 ADNPQ9H2P0 1102 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 NLE1Q9NVX2 485 aaPredicted RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 SIDT1Q9NXL6 827 aaKnown RBP11.67□□□□□ -0.54
MED28-203ENST00000503945 ZDHHC3Q9NYG2 299 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 SEMA5BQ9P283 1151 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 SLC24A2Q9UI40 661 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 KCND3Q9UK17 655 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 GUCA1BQ9UMX6 200 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 RPS6KL1Q9Y6S9 549 aa11.67□□□□□ -0.54
MED28-203ENST00000503945 IGHV5-51A0A0C4DH38 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms