RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF169Q14929 603 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 CYP2A13Q16696 494 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF630Q2M218 657 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF789Q5FWF6 425 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 B3GNTL1Q67FW5 361 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 FAM180AQ6UWF9 173 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 B4GALNT4Q76KP1 1039 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 GDAP1Q8TB36 358 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 BRSK1Q8TDC3 778 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 ZFPM2Q8WW38 1151 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 PPM1MQ96MI6 270 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 GBP5Q96PP8 586 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 VPS35Q96QK1 796 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 TRIM8Q9BZR9 551 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 TRIM7Q9C029 511 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 C1GALT1Q9NS00 363 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 TAS2R14Q9NYV8 317 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 SHOC2Q9UQ13 582 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 PCNX1Q96RV3 2341 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 TMCO5BA8MYB1 307 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF749O43361 778 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 JRKO75564 520 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 MSL3P1P0C860 447 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 IL1R2P27930 398 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 AIMP2Q13155 320 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 GALNT3Q14435 633 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 CCDC122Q5T0U0 273 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 TMC3Q7Z5M5 1100 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 MRGPRGQ86SM5 289 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF808Q8N4W9 903 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 NEK11Q8NG66 645 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 HDAC11Q96DB2 347 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 CNDP1Q96KN2 507 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 SLX1AQ9BQ83 275 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 GPR63Q9BZJ6 419 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 OLAHQ9NV23 265 aa15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 CFAP20Q9Y6A4 193 aaKnown RBP15.37■□□□□ 0.05
PDLIM7-210ENST00000503827 MASP2O00187 686 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 POP7O75817 140 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 HLA-DQB2P05538 268 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 CCDC172P0C7W6 258 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 RARAP10276 462 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 POLR2CP19387 275 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 CAPN3P20807 821 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 CCNCP24863 283 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 SSTR2P30874 369 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 CD86P42081 329 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 OTUD4Q01804 1114 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 GALNT2Q10471 571 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF385CQ66K41 422 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 IGFL2Q6UWQ7 119 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 BCORP1Q8N888 145 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 TEKT4Q8WW24 435 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 FATE1Q969F0 183 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 PTERQ96BW5 349 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 XPO4Q9C0E2 1151 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 MAGEE1Q9HCI5 957 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 PCDH18Q9HCL0 1135 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 NDOR1Q9UHB4 597 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 POMT2Q9UKY4 750 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 TACC2O95359 2948 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 DCHS2Q6V1P9 2916 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 MTORP42345 2549 aa15.36■□□□□ 0.05
PDLIM7-210ENST00000503827 AGPSO00116 658 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 MATN2O00339 956 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 MFSD11O43934 449 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 PIRTP0C851 137 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 HLA-DPA1P20036 260 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 NFE2L1Q14494 772 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 TLR1Q15399 786 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 DPCR1Q3MIW9 517 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 AGAP7PQ5VUJ5 663 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 IRAK1BP1Q5VVH5 260 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 MTFR2Q6P444 385 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 FAM83HQ6ZRV2 1179 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 PPP1R32Q7Z5V6 425 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 GPR135Q8IZ08 494 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 OR2Y1Q8NGV0 311 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 C12orf66Q96MD2 445 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 AGAP4Q96P64 663 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 ZCCHC2Q9C0B9 1178 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 EPS8L2Q9H6S3 715 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 KIR3DX1Q9H7L2 352 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 IFT80Q9P2H3 777 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 TMPRSS11EQ9UL52 423 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 ZNF711Q9Y462 761 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 DNMT3AQ9Y6K1 912 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 CNTRLQ7Z7A1 2325 aa15.35■□□□□ 0.05
PDLIM7-210ENST00000503827 CCDC66A2RUB6 948 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 MMP2P08253 660 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 FERP16591 822 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 KCNK10P57789 538 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 BECN1Q14457 450 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 KRT81Q14533 505 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 ATP13A5Q4VNC0 1218 aa15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 DUS1LQ6P1R4 473 aaKnown RBP15.34■□□□□ 0.05
PDLIM7-210ENST00000503827 RPTNQ6XPR3 784 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms