RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 C12orf66Q96MD2 445 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 EBNA1BP2Q99848 306 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 ERP44Q9BS26 406 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 NAT9Q9BTE0 207 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 FOXP3Q9BZS1 431 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 OR52A5Q9H2C5 316 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 IMP3Q9NV31 184 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 SNX24Q9Y343 169 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 ZFC3H1O60293 1989 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 CCDC187A0A096LP49 1063 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 A0A1W2PNU3 283 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 PFDN6O15212 129 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 HOXB3P14651 431 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 RPL21P46778 160 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 CD151P48509 253 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 MRPS25P82663 173 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 GPR18Q14330 331 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 LONRF1Q17RB8 773 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 TMEM71Q6P5X7 295 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 ZNF449Q6P9G9 518 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 WDR74Q6RFH5 385 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 ZNF574Q6ZN55 896 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 CILP2Q8IUL8 1156 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 PDIK1LQ8N165 341 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 OTUD6BQ8N6M0 293 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 OR4D9Q8NGE8 314 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 ZFPM2Q8WW38 1151 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 ELMO1Q92556 727 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 ZNF592Q92610 1267 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 CARD6Q9BX69 1037 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 TSSK1BQ9BXA7 367 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 STRADBQ9C0K7 418 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 SEMA6CQ9H3T2 930 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 CCDC86Q9H6F5 360 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 PDP2Q9P2J9 529 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 HEBP2Q9Y5Z4 205 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 FAM169AQ9Y6X4 670 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 AKAP13Q12802 2813 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 KNTC1P50748 2209 aa17.82■□□□□ 0.44
PDLIM7-209ENST00000503346 SLC5A10A0PJK1 596 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 TTC4O95801 387 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 PDHA2P29803 388 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 LSSP48449 732 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 LIMK2P53671 638 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 ADARP55265 1226 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 PLOD1Q02809 727 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 CYP4F3Q08477 520 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 CBLBQ13191 982 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 EIF3IQ13347 325 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 TRA2AQ13595 282 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 THOC5Q13769 683 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 TUBB2AQ13885 445 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 HIF1AQ16665 826 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 BBS9Q3SYG4 887 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 LMNTD2Q8IXW0 634 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 WDR36Q8NI36 951 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 LPGAT1Q92604 370 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 TMEM159Q96B96 161 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 LRRC39Q96DD0 335 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 PWWP2AQ96N64 755 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 TUBB2BQ9BVA1 445 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 POLR1BQ9H9Y6 1135 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 EPB41L5Q9HCM4 733 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 IL1RAPL1Q9NZN1 696 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 WHRNQ9P202 907 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 GNPTGQ9UJJ9 305 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 PCDHGA8Q9Y5G5 932 aa17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 CFAP20Q9Y6A4 193 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-209ENST00000503346 IGHV5-10-1A0A0J9YXX1 117 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 IFRD1O00458 451 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 BANF1O75531 89 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 DXOO77932 396 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 UBXN7O94888 489 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 MPOP05164 745 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 THRAP10827 490 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 NDUFS1P28331 727 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 CCR7P32248 378 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 PREPP48147 710 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 ARL4CP56559 192 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 GABREP78334 506 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 CRYMQ14894 314 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 SPANXN3Q5MJ09 141 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 DUPD1Q68J44 220 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 ZNF470Q6ECI4 717 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 PTRHD1Q6GMV3 140 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 DUS1LQ6P1R4 473 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 IGF2-ASQ6U949 168 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 CENPUQ71F23 418 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 PDZD3Q86UT5 571 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 IGDCC3Q8IVU1 814 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 MDM1Q8TC05 714 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 LKAAEAR1Q8TD35 194 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 NCSTNQ92542 709 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 BIRC8Q96P09 236 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 C20orf96Q9NUD7 363 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 INTS10Q9NVR2 710 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 OGFRQ9NZT2 677 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 SATB2Q9UPW6 733 aa17.8■□□□□ 0.44
PDLIM7-209ENST00000503346 VPS9D1Q9Y2B5 631 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms