RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ZNF7P17097 686 aaPredicted RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 BPIP17213 487 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 ITGALP20701 1170 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 NAA20P61599 178 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 CCNIQ14094 377 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 ARHGAP15Q53QZ3 475 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 TMEM240Q5SV17 173 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 KANK2Q63ZY3 851 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 AAGABQ6PD74 315 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 TXNDC11Q6PKC3 985 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 LRRC74BQ6ZQY2 392 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 GPSM1Q86YR5 675 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 HMGCLL1Q8TB92 370 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 SPPL3Q8TCT6 385 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 C3orf30Q96M34 536 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 CLPBQ9H078 707 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 IL26Q9NPH9 171 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 FKBP14Q9NWM8 211 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 NDE1Q9NXR1 346 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 TRBV5-4A0A0C4DH59 114 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 PSMD12O00232 456 aaPredicted RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 RHOP08100 348 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 HK3P52790 923 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 FOXA1P55317 472 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 NFATC2Q13469 925 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 PTK2BQ14289 1009 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 FASTKQ14296 549 aaKnown RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 MAPRE2Q15555 327 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 ANKDD1AQ495B1 522 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 FBXO48Q5FWF7 155 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 PTRHD1Q6GMV3 140 aaKnown RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 ANGPTL8Q6UXH0 198 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 BNC2Q6ZN30 1099 aaPredicted RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 RBFAQ8N0V3 343 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 PGAM4Q8N0Y7 254 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 CBARPQ8N350 705 aaPredicted RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 TWIST2Q8WVJ9 160 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 JADE3Q92613 823 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 TIFAQ96CG3 184 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 PDLIM5Q96HC4 596 aaKnown RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 TUBGCP5Q96RT8 1024 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 LYSMD1Q96S90 227 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 SERPINI1Q99574 410 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 TTC1Q99614 292 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 S100A14Q9HCY8 104 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 SEMA4BQ9NPR2 832 aaPredicted RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 TLR9Q9NR96 1032 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 DDX18Q9NVP1 670 aaKnown RBP11.41□□□□□ -0.58
USP46-204ENST00000503060 SLC25A13Q9UJS0 675 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 DOCK6Q96HP0 2047 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 SCN8AQ9UQD0 1980 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 GLYATL1P3A0A0U1RQE8 302 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 ATP6AP2A0A1C7CYW4 349 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 NCF1BA6NI72 391 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 NCF1CA8MVU1 366 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 NEDD8-MDP1E9PL57 170 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PIP5K1BO14986 540 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 HOXC11O43248 304 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 TLL1O43897 1013 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 BNIP3LO60238 219 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 TMEM127O75204 238 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 ATP6AP2O75787 350 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 ENO3P13929 434 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 NCF1P14598 390 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 SPAM1P38567 509 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 AGTR2P50052 363 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 ATP4BP51164 291 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PRKG2Q13237 762 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 SMAD4Q13485 552 aaKnown RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 ART3Q13508 389 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 CHRNA6Q15825 494 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 GEN1Q17RS7 908 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 AGKQ53H12 422 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 TCHHL1Q5QJ38 904 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 GRAMD4Q6IC98 578 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 TSPAN33Q86UF1 283 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 IRF7Q92985 503 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 ECHDC3Q96DC8 303 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 KCNA7Q96RP8 456 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 CDRT15Q96T59 188 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 NPAS2Q99743 824 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 TMEM106CQ9BVX2 250 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 BOCQ9BWV1 1114 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 SUV39H2Q9H5I1 410 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 AKTIPQ9H8T0 292 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 WDR41Q9HAD4 459 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 TDP1Q9NUW8 608 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 NMRK1Q9NWW6 199 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 GNPTGQ9UJJ9 305 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PCTPQ9UKL6 214 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PPM1HQ9ULR3 514 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 NPIPB15A6NHN6 443 aaPredicted RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 A8MX80 341 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 PABPC1P11940 636 aaKnown RBP11.4□□□□□ -0.58
USP46-204ENST00000503060 UGT1A6P19224 532 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 UGT1A1P22309 533 aa11.4□□□□□ -0.58
USP46-204ENST00000503060 UGT1A4P22310 534 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms