RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GALNT12Q8IXK2 581 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 LRRC20Q8TCA0 184 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 C5P01031 1676 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ORC5O43913 435 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 PTSQ03393 145 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 BCL2L1Q07817 233 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 GRM2Q14416 872 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 FBXO48Q5FWF7 155 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 RABL3Q5HYI8 236 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 FBXL19Q6PCT2 694 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 DCDC5Q6ZRR9 648 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 BHMTQ93088 406 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF597Q96LX8 424 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 PTPRJQ12913 1337 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF45Q02386 682 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF517Q6ZMY9 492 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 SCML4Q8N228 414 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 RTL3Q8N8U3 475 aaKnown RBP16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 OR4K2Q8NGD2 314 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ATL1Q8WXF7 558 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 PCDHB1Q9Y5F3 818 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 H3BMQ9 156 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 SEMA3DO95025 777 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 NDST3O95803 873 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 TRIM48Q8IWZ4 208 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 CDK20Q8IZL9 346 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 BTN2A2Q8WVV5 523 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ASZ1Q8WWH4 475 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 COG8Q96MW5 612 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 KIFC1Q9BW19 673 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 TMPRSS4Q9NRS4 437 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ITM2BQ9Y287 266 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 GIT1Q9Y2X7 761 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 hCG_2039718K7EN88 272 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SGTAO43765 313 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 GOT2P00505 430 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 TBC1D25Q3MII6 688 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC39A12Q504Y0 691 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 TREML2Q5T2D2 321 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 PGM2L1Q6PCE3 622 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 RBFAQ8N0V3 343 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 WDTC1Q8N5D0 677 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 UXS1Q8NBZ7 420 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 RTP4Q96DX8 246 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CNPPD1Q9BV87 410 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 EVA1BQ9NVM1 165 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC25A13Q9UJS0 675 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SMIM28A0A1B0GU29 152 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SH3BGRLO75368 114 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ALDH1A2O94788 518 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CLTBP09497 229 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 PRPS2P11908 318 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 COL6A1P12109 1028 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ABATP80404 500 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CDKL1Q00532 357 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 STX4Q12846 297 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 IL18Q14116 193 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SLAIN1Q8ND83 568 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CRELD1Q96HD1 420 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 FTHL17Q9BXU8 183 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 OXCT2Q9BYC2 517 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 EIF2B4Q9UI10 523 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 PHF11Q9UIL8 331 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 TRPV2Q9Y5S1 764 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 FABP12A6NFH5 140 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CCL22O00626 93 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 FPGTO14772 594 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SIX3O95343 332 aaPredicted RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 HPRP00739 348 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 GRIA2P42262 883 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 RORCP51449 518 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 VBP1P61758 197 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF252P-AS1Q0IIN9 211 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF181Q2M3W8 571 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 DDI2Q5TDH0 399 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 TXNDC5Q8NBS9 432 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF671Q8TAW3 534 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 MED28Q9H204 178 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SFMBT1Q9UHJ3 866 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 DNAJA1P31689 397 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 HSPA14Q0VDF9 509 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 CYP20A1Q6UW02 462 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 LIX1Q8N485 282 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ASCC1Q8N9N2 400 aaKnown RBP16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 HERC2P3Q9BVR0 1158 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 NEK6Q9HC98 313 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 ABCB9Q9NP78 766 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 C1orf109Q9NX04 203 aa16.98■□□□□ 0.31
HMGXB3-201ENST00000502717 DAOAP59103 153 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 DSC2Q02487 901 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 MEAF6Q9HAF1 191 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 FBRSL1Q9HCM7 1045 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 ARMC1Q9NVT9 282 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 MYH1P12882 1939 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 MYH4Q9Y623 1939 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms