RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 COPG2Q9UBF2 871 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 GPN3Q9UHW5 284 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-209ENST00000498725 PTRH2Q9Y3E5 179 aaKnown RBP8.88□□□□□ -0.99
CCDC171-209ENST00000498725 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 C2CD3Q4AC94 2353 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 LRRC53A6NM62 1247 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 LGALS16A8MUM7 142 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 AURKAO14965 403 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ZNF749O43361 778 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A9O60656 530 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 DIAPH2O60879 1101 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 CBSLP0DN79 551 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 MTHFD1P11586 935 aaKnown RBP8.87□□□□□ -0.99
CCDC171-209ENST00000498725 PVRP15151 417 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A6P19224 532 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 HLA-DPA1P20036 260 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 CDK11BP21127 795 aaKnown RBP8.87□□□□□ -0.99
CCDC171-209ENST00000498725 AGXTP21549 392 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A1P22309 533 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A4P22310 534 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ITGA3P26006 1051 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 RORAP35398 523 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 CBSP35520 551 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 PREPP48147 710 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 CTSCP53634 463 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 DCDC1P59894 354 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 SLC25A11Q02978 314 aaKnown RBP8.87□□□□□ -0.99
CCDC171-209ENST00000498725 GBE1Q04446 702 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ZBTB17Q13105 803 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 NOMO1Q15155 1222 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 CRB2Q5IJ48 1285 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 DCAF10Q5QP82 559 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ZFYVE27Q5T4F4 411 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 PPP1R2P3Q6NXS1 205 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 B4GALNT4Q76KP1 1039 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ZNF571Q7Z3V5 609 aaPredicted RBP8.87□□□□□ -0.99
CCDC171-209ENST00000498725 TMC3Q7Z5M5 1100 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 CPNE8Q86YQ8 564 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 LRRC49Q8IUZ0 686 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 RASGEF1AQ8N9B8 481 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ANKRD20A12PQ8NF67 263 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 ENOX1Q8TC92 643 aaKnown RBP8.87□□□□□ -0.99
CCDC171-209ENST00000498725 TEKT4Q8WW24 435 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 FER1L6-AS2Q96M78 137 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 LRFN5Q96NI6 719 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 TRAPPC9Q96Q05 1148 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 NRTNQ99748 197 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 SYT11Q9BT88 431 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 NUP62CLQ9H1M0 184 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 HAUS4Q9H6D7 363 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 RUBCNLQ9H714 662 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A7Q9HAW7 530 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A10Q9HAW8 530 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 UGT1A8Q9HAW9 530 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 MRPL47Q9HD33 250 aaKnown RBP8.87□□□□□ -0.99
CCDC171-209ENST00000498725 LATS2Q9NRM7 1088 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 RAD18Q9NS91 495 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 PADI2Q9Y2J8 665 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 SPO11Q9Y5K1 396 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 DOCK10Q96BY6 2186 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 PCM1Q15154 2024 aa8.87□□□□□ -0.99
CCDC171-209ENST00000498725 DDX3XO00571 662 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCDC171-209ENST00000498725 E2F3O00716 465 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 BUD23O43709 281 aaKnown RBP8.86□□□□□ -0.99
CCDC171-209ENST00000498725 MT-CYBP00156 380 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-209ENST00000498725 POLBP06746 335 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 SKILP12757 684 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 ST6GAL1P15907 406 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 FOLR3P41439 243 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 ADCY2Q08462 1091 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 SLC10A2Q12908 348 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-209ENST00000498725 CDC16Q13042 620 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 PRKAA1Q13131 559 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 DPYSL3Q14195 570 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 PAFAH1B3Q15102 231 aaKnown RBP8.86□□□□□ -0.99
CCDC171-209ENST00000498725 PPP2R5EQ16537 467 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 CYP2A13Q16696 494 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 DEFB110Q30KQ9 67 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 FNBP1LQ5T0N5 605 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 PDPK2PQ6A1A2 396 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 FAM151BQ6UXP7 276 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 Q6ZS92 163 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 CNTD1Q8N815 330 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 KCTD6Q8NC69 237 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 SPATA22Q8NHS9 363 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 DNAJB14Q8TBM8 379 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 TM9SF4Q92544 642 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 N4BP2L2Q92802 583 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-209ENST00000498725 LURAP1Q96LR2 239 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 AGAP3Q96P47 875 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 TSGA13Q96PP4 275 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 GBP5Q96PP8 586 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 ERGIC2Q96RQ1 377 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 TRIB3Q96RU7 358 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 MAGEE1Q9HCI5 957 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 P4HTMQ9NXG6 502 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 UBP1Q9NZI7 540 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 AMACRQ9UHK6 382 aa8.86□□□□□ -0.99
CCDC171-209ENST00000498725 SLC24A2Q9UI40 661 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms