RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 PFKPQ01813 784 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 DMTNQ08495 405 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 CCDC15Q0P6D6 951 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 BST1Q10588 318 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ASPHQ12797 758 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 STX3Q13277 289 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 SMAD2Q15796 467 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 TMEM52BQ4KMG9 183 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ATP13A5Q4VNC0 1218 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 TECRLQ5HYJ1 363 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 LIPMQ5VYY2 423 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 CES4AQ5XG92 561 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 FBXW10Q5XX13 1052 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 C6orf89Q6UWU4 347 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 LIPIQ6XZB0 460 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 FAM47EQ6ZV65 393 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ERN2Q76MJ5 926 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 TRMT11Q7Z4G4 463 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 HSD11B1LQ7Z5J1 315 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 YTHDF3Q7Z739 585 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 ISCA2Q86U28 154 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 PIM3Q86V86 326 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 SLC22A9Q8IVM8 553 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 C10orf107Q8IVU9 208 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 SLC44A3Q8N4M1 653 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 NKAPQ8N5F7 415 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 PNPLA1Q8N8W4 532 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ANKRD49Q8WVL7 239 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 FAM131CQ96AQ9 280 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ARRDC3Q96B67 414 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 SHDQ96IW2 340 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 COQ10AQ96MF6 247 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 VPS35Q96QK1 796 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ELAC2Q9BQ52 826 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 ZSCAN5AQ9BUG6 496 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 PHF7Q9BWX1 381 aaPredicted RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 FAM83DQ9H4H8 585 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 RABEP2Q9H5N1 569 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 TFB2MQ9H5Q4 396 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 KCNK12Q9HB15 430 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 FBRSL1Q9HCM7 1045 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 KCTD5Q9NXV2 234 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 KLHL14Q9P2G3 628 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 XPR1Q9UBH6 696 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 CRLS1Q9UJA2 301 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 GNPTGQ9UJJ9 305 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 ARL2BPQ9Y2Y0 163 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 DHRS7Q9Y394 339 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
CDC42-205ENST00000498236 SZT2Q5T011 3432 aa7.56□□□□□ -1.2
CDC42-205ENST00000498236 MEGF11A6BM72 1044 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 A8MX80 341 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 F8W8V4 182 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 EIF3FO00303 357 aaPredicted RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 WNT9AO14904 365 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 GPR39O43194 453 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 DLX3O60479 287 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 RNASEH1O60930 286 aaKnown RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 DNAJC6O75061 913 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 AP2A2O94973 939 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 ATE1O95260 518 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 TSPAN12O95859 305 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 TROVE2P10155 538 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDC42-205ENST00000498236 GM2AP17900 193 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 UGT1A6P19224 532 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 C5AR1P21730 350 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 UGT1A1P22309 533 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 UGT1A4P22310 534 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 KCNA5P22460 613 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 NTSR1P30989 418 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CA5AP35218 305 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 UGT1A3P35503 534 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 UGT1A5P35504 534 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 ETV3P41162 512 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 GLRBP48167 497 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 HK2P52789 917 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 PGGT1BP53609 377 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 IL2P60568 153 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 NAA20P61599 178 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 IRX4P78413 519 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 MRPS21P82921 87 aaKnown RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 DPTQ07507 201 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CSHL1Q14406 222 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CST6Q15828 149 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 HSF5Q4G112 596 aaPredicted RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 PRRT3Q5FWE3 981 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 LRRC73Q5JTD7 316 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 PIP5KL1Q5T9C9 394 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 PAQR3Q6TCH7 311 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 RFLNAQ6ZTI6 216 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 Q6ZVL8 140 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 PIWIL4Q7Z3Z4 852 aaKnown RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 CRLF3Q8IUI8 442 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CHPFQ8IZ52 775 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 DDHD1Q8NEL9 900 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms