RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 MTHFD1P11586 935 aaKnown RBP12.3□□□□□ -0.44
TRIM27-207ENST00000498117 FERP16591 822 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 CDH3P22223 829 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 FOLR3P41439 243 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 CD86P42081 329 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 PRKAA1Q13131 559 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 XRCC4Q13426 336 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 ZNF789Q5FWF6 425 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
TRIM27-207ENST00000498117 FCRL6Q6DN72 434 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 NXPE1Q8N323 547 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 TEKT4Q8WW24 435 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 PPM1MQ96MI6 270 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 TSGA13Q96PP4 275 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 VPS35Q96QK1 796 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 GPR63Q9BZJ6 419 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 IMP3Q9NV31 184 aaKnown RBP12.3□□□□□ -0.44
TRIM27-207ENST00000498117 GPN3Q9UHW5 284 aaPredicted RBP12.3□□□□□ -0.44
TRIM27-207ENST00000498117 PTRH2Q9Y3E5 179 aaKnown RBP12.3□□□□□ -0.44
TRIM27-207ENST00000498117 DNMT3AQ9Y6K1 912 aaPredicted RBP12.3□□□□□ -0.44
TRIM27-207ENST00000498117 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
TRIM27-207ENST00000498117 PCSK5Q92824 1860 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 E7EQ34 232 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 MATN2O00339 956 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 ZNF749O43361 778 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 SLC4A1P02730 911 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 MMP2P08253 660 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 BPIP17213 487 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 POLR2CP19387 275 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 HTR1EP28566 365 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 CDC16Q13042 620 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 AIMP2Q13155 320 aaKnown RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 GALNT3Q14435 633 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 BECN1Q14457 450 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 KRT81Q14533 505 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 HIF1AQ16665 826 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 CYP2A13Q16696 494 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 ATP13A5Q4VNC0 1218 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 VWA2Q5GFL6 755 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 ZNF385CQ66K41 422 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 B3GNTL1Q67FW5 361 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 SPNS3Q6ZMD2 512 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 B4GALNT4Q76KP1 1039 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 BEND7Q8N7W2 519 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 ITLN2Q8WWU7 325 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 PTERQ96BW5 349 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 GBP5Q96PP8 586 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 INSM2Q96T92 566 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 ZCCHC2Q9C0B9 1178 aaKnown RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 MRPL47Q9HD33 250 aaKnown RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 SLC24A2Q9UI40 661 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 TMPRSS11EQ9UL52 423 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 ZNF711Q9Y462 761 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 CFAP20Q9Y6A4 193 aaKnown RBP12.29□□□□□ -0.44
TRIM27-207ENST00000498117 TACC2O95359 2948 aa12.29□□□□□ -0.44
TRIM27-207ENST00000498117 MFSD11O43934 449 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 JRKO75564 520 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 SNRPB2P08579 225 aaKnown RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 PIRTP0C851 137 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 GZMAP12544 262 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 TCF4P15884 667 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 PIGHQ14442 188 aaPredicted RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 NFE2L1Q14494 772 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 ZNF169Q14929 603 aaPredicted RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 PAFAH1B3Q15102 231 aaKnown RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 TESK1Q15569 626 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 ZNF630Q2M218 657 aaPredicted RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 AGAP7PQ5VUJ5 663 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 METRNLQ641Q3 311 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 IGFL2Q6UWQ7 119 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 BNC2Q6ZN30 1099 aaPredicted RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 FAM83HQ6ZRV2 1179 aaPredicted RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 IRF2BP2Q7Z5L9 587 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 GPR135Q8IZ08 494 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 POM121Q96HA1 1249 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 C12orf66Q96MD2 445 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 AGAP4Q96P64 663 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 SRPK1Q96SB4 655 aaKnown RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 SLX1AQ9BQ83 275 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 KIR3DX1Q9H7L2 352 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 OLAHQ9NV23 265 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 SUCOQ9UBS9 1254 aaKnown RBP12.28□□□□□ -0.44
TRIM27-207ENST00000498117 POMT2Q9UKY4 750 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 CSAG2Q9Y5P2 127 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 COLEC10Q9Y6Z7 277 aa12.28□□□□□ -0.44
TRIM27-207ENST00000498117 AGPSO00116 658 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 MASP2O00187 686 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 HLA-DPA1P20036 260 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 MX2P20592 715 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 CAPN3P20807 821 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 NDUFS1P28331 727 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 UBE2HP62256 183 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 KRT33BQ14525 404 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 TLR1Q15399 786 aa12.27□□□□□ -0.45
TRIM27-207ENST00000498117 LDLRAP1Q5SW96 308 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms