RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IFNAR1P17181 557 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SPINK2P20155 84 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 KLRC1P26715 233 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GJC1P36383 396 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MMP12P39900 470 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GRIA4P48058 902 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SESN3P58005 492 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 JAG1P78504 1218 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MVKQ03426 396 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GLO1Q04760 184 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 RGS1Q08116 209 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TWF1Q12792 350 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 BBS9Q3SYG4 887 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FBLN7Q53RD9 439 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ALG10Q5BKT4 473 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ALG10BQ5I7T1 473 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF529Q6P280 563 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 OLFM4Q6UX06 510 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 RNF207Q6ZRF8 634 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 C22orf34Q6ZV56 151 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GDPD3Q7L5L3 318 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ARHGAP22Q7Z5H3 698 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 UNC93AQ86WB7 457 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF547Q8IVP9 402 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SGPP2Q8IWX5 399 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 C10orf126Q8N4M7 172 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DTX3Q8N9I9 347 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CSNK1G2-AS1Q8NCQ2 148 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TRPV1Q8NER1 839 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MPLKIPQ8TAP9 179 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CYP2W1Q8TAV3 490 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GTF3C2Q8WUA4 911 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 SNX33Q8WV41 574 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 RFKQ969G6 155 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 VPS50Q96JG6 964 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PDLIM2Q96JY6 352 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MEGF10Q96KG7 1140 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DHRS1Q96LJ7 313 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 C16orf92Q96LL3 132 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SLC6A18Q96N87 628 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HHIPQ96QV1 700 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PLIN2Q99541 437 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TM2D3Q9BRN9 247 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 NT5C1AQ9BXI3 368 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 RHOBTB2Q9BYZ6 727 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SLC25A22Q9H936 323 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 BARX1Q9HBU1 254 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 PAK6Q9NQU5 681 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 HEBP1Q9NRV9 189 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 DDX19AQ9NUU7 478 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 TUBA8Q9NY65 449 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 FLRT1Q9NZU1 646 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CACNG4Q9UBN1 327 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GABBR1Q9UBS5 961 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HSPB7Q9UBY9 170 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SLCO3A1Q9UIG8 710 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 IKZF3Q9UKT9 509 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SLC7A7Q9UM01 511 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 POMPQ9Y244 141 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ITPR3Q14573 2671 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 C2CD3Q4AC94 2353 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SNED1Q8TER0 1413 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GPRASP1Q5JY77 1395 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GRXCR1A8MXD5 290 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TRIM49D1C9J1S8 452 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 POC1B-GALNT4F8VUJ3 575 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CLIC1O00299 241 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CCRL2O00421 344 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 UPK2O00526 184 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 NKRFO15226 690 aaKnown RBP eCLIP1.41□□□□□ -2.18
XRN1-214ENST00000498077 DYNC1LI2O43237 492 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 UPK1BO75841 260 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 NRASP01111 189 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HRASP01112 189 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 KRASP01116 189 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SP1P08047 785 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GSTP1P09211 210 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 RD3LP0DJH9 198 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CCL5P13501 91 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PTAFRP25105 342 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 IMPA1P29218 277 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 GABRA5P31644 462 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MAGEA12P43365 314 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 OR3A1P47881 315 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FNTBP49356 437 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ACOT2P49753 483 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 HNRNPA3P51991 378 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZNF136P52737 540 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 MRPS35P82673 323 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 ZXDAP98168 799 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TFAMQ00059 246 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 DHODHQ02127 395 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 CSTF1Q05048 431 aaKnown RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 GABPB1Q06547 395 aaPredicted RBP1.41□□□□□ -2.18
XRN1-214ENST00000498077 FCHO2Q0JRZ9 810 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 ECH1Q13011 328 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 SLC12A1Q13621 1099 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 TPBGQ13641 420 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 FLOT2Q14254 428 aa1.41□□□□□ -2.18
XRN1-214ENST00000498077 PTGR1Q14914 329 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms