RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 HM13Q8TCT9 377 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 TRPC4APQ8TEL6 797 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 PPP4R1Q8TF05 950 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 TMEM39BQ9GZU3 492 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 PIGMQ9H3S5 423 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 ECHDC1Q9NTX5 307 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 EHD2Q9NZN4 543 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 CNOT8Q9UFF9 292 aaKnown RBP3.3□□□□□ -1.88
SMC4-227ENST00000497984 YIPF1Q9Y548 306 aa3.3□□□□□ -1.88
SMC4-227ENST00000497984 ARID4BQ4LE39 1312 aaPredicted RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 C15orf62A8K5M9 175 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 B4E171 279 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 F5H0A9 414 aaPredicted RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 ATP2A1O14983 1001 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 ICAM1P05362 532 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 CEACAM8P31997 349 aaPredicted RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 PBX3P40426 434 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 RGS2P41220 211 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 TSPAN7P41732 249 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 THOP1P52888 689 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 RPS3AP61247 264 aaKnown RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 SP3Q02447 781 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 G3BP1Q13283 466 aaKnown RBP eCLIP3.29□□□□□ -1.881e-39■■■■■ 140
SMC4-227ENST00000497984 MFAP5Q13361 173 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 P2RY6Q15077 328 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 TBCEQ15813 527 aaPredicted RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 TSTQ16762 297 aaKnown RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 PCGF3Q3KNV8 242 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 GLIPR1L2Q4G1C9 344 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 CCDC70Q6NSX1 233 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 NCEH1Q6PIU2 408 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 CYP20A1Q6UW02 462 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 SDCCAG8Q86SQ7 713 aaPredicted RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 TSPAN33Q86UF1 283 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 FRMD1Q8N878 549 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 SMPDL3BQ92485 455 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 ARHGEF2Q92974 986 aaKnown RBP3.29□□□□□ -1.88
SMC4-227ENST00000497984 MUC13Q9H3R2 512 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 RABGAP1Q9Y3P9 1069 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 MYH15Q9Y2K3 1946 aa3.29□□□□□ -1.88
SMC4-227ENST00000497984 ABCA7Q8IZY2 2146 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 IGHV4-61A0A0C4DH41 118 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 CCDC189A1A4V9 331 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 LIPT2A6NK58 231 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 J3KRW8 73 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 GCNT3O95395 438 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 IGHV4-59P01825 116 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 EIF2S1P05198 315 aaKnown RBP3.28□□□□□ -1.88
SMC4-227ENST00000497984 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 ACTN1P12814 892 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 SELLP14151 372 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 CHMP24386 653 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 MPP1Q00013 466 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 NAB2Q15742 525 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
SMC4-227ENST00000497984 SLC16A9Q7RTY1 509 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 CPLX4Q7Z7G2 160 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 TMEM143Q96AN5 459 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 PERPQ96FX8 193 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 EGLN2Q96KS0 407 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 SYT15Q9BQS2 421 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 DIAPH3Q9NSV4 1193 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 ZNF69Q9UC07 566 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 MTMR6Q9Y217 621 aa3.28□□□□□ -1.88
SMC4-227ENST00000497984 FAM237BA0A1B0GVD1 139 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 DUS4LO95620 317 aaKnown RBP3.27□□□□□ -1.89
SMC4-227ENST00000497984 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 HIST1H2ABP04908 130 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 LAMP2P13473 410 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 HIST1H2ADP20671 130 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 CBLP22681 906 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 HRH2P25021 359 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 CD81P60033 236 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 PRAMEP78395 509 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 CEBPZQ03701 1054 aaKnown RBP3.27□□□□□ -1.89
SMC4-227ENST00000497984 HIST3H2AQ7L7L0 130 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 TDRD7Q8NHU6 1098 aaKnown RBP3.27□□□□□ -1.89
SMC4-227ENST00000497984 POMGNT1Q8WZA1 660 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 SEMA4DQ92854 862 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 C1orf74Q96LT6 269 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 GFI1Q99684 422 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 PIGQQ9BRB3 760 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 POLR1BQ9H9Y6 1135 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 EPB41L5Q9HCM4 733 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 RRP7BPQ9NSQ0 103 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 IRAK4Q9NWZ3 460 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 RNF186Q9NXI6 227 aa3.27□□□□□ -1.89
SMC4-227ENST00000497984 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.27□□□□□ -1.89
SMC4-227ENST00000497984 A0A087X0M5 115 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 IGLV9-49A0A0B4J1Y8 123 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 A0A1B0GX30 115 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 OR2M5A3KFT3 312 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 A8MZ25 164 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 ZNF197O14709 1029 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 SMAD9O15198 467 aaKnown RBP3.26□□□□□ -1.89
SMC4-227ENST00000497984 PLPP2O43688 288 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 TMCC2O75069 709 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 TBX18O95935 607 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 TMEM11P17152 192 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 ACADLP28330 430 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms