RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CARD9Q9H257 536 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 NSUN3Q9H649 340 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PPANQ9NQ55 473 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 TRPV5Q9NQA5 729 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 KLHL1Q9NR64 748 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SLC8A2Q9UPR5 921 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ITM2BQ9Y287 266 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 NAALAD2Q9Y3Q0 740 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SIRT4Q9Y6E7 314 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 DNMT1P26358 1616 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SHANK2Q9UPX8 1470 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 A0A087WZY1 265 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 A0A0U1RQF3 1178 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 TYW5A2RUC4 315 aaKnown RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 XKRY2A2RUG3 117 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 MAGEA13PA6NCF6 341 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 CTDSPLO15194 276 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 FCGR3BO75015 233 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 HSF2BPO75031 334 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SCGB2A1O75556 95 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 RPS6KA4O75676 772 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PCCBP05166 539 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 DANCRP0C864 163 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PLA2G4BP0C869 781 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 THRBP10828 461 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 G6PDP11413 515 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SKILP12757 684 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SRD5A1P18405 259 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 HNRNPA2B1P22626 353 aaKnown RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PSMB4P28070 264 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 TAGLN2P37802 199 aaKnown RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PTGER3P43115 390 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PPP2R2BQ00005 443 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 GALK2Q01415 458 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PPP1R7Q15435 360 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 XKR9Q5GH70 373 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 ANGPTL8Q6UXH0 198 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 DPPA4Q7L190 304 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 CIR1Q86X95 450 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 ZNF573Q86YE8 665 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 FOXP4Q8IVH2 680 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SFTPA1Q8IWL2 248 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PAQR4Q8N4S7 273 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 LINC01465Q8N7H1 131 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 AMER3Q8N944 861 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 OR6C4Q8NGE1 309 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 OR52N4Q8NGI2 321 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 OR2T34Q8NGX1 318 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 RP9Q8TA86 221 aaKnown RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 ELP5Q8TE02 316 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 CASP10Q92851 521 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 CAVIN3Q969G5 261 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 LCORQ96JN0 433 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 COQ10AQ96MF6 247 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 NECTIN4Q96NY8 510 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 CRAMP1Q96RY5 1269 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 DDOQ99489 341 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 MPHOSPH9Q99550 1183 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SSX3Q99909 188 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 GTPBP2Q9BX10 602 aaKnown RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 GCOM2Q9BZD3 368 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 GALNT9Q9HCQ5 603 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SMPD3Q9NY59 655 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 UBQLN2Q9UHD9 624 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SNX6Q9UNH7 406 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 A3GALT2U3KPV4 340 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 MST1RQ04912 1400 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 PTPRKQ15262 1439 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 CLTCQ00610 1675 aaKnown RBP5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SPATA31A5Q5VU36 1347 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SPATA31A6Q5VVP1 1343 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 TTC21BQ7Z4L5 1316 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 SPATA31A7Q8IWB4 1347 aa5.97□□□□□ -1.45
BRCA1-224ENST00000497488 MROH1Q8NDA8 1641 aa5.96□□□□□ -1.45
BRCA1-224ENST00000497488 CYP2D7A0A087X1C5 515 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 TEX51A0A1B0GUA7 166 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 LACTBL1A8MY62 500 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 MAP2K7O14733 419 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 PPEF2O14830 753 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 NUDT21O43809 227 aaKnown RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 MTX2O75431 263 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF821O75541 412 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 CHRM2P08172 466 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 CD63P08962 238 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 SLC6A6P31641 620 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 RPS19P39019 145 aaKnown RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 SMSP52788 366 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 RABGGTBP53611 331 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 HSPA2P54652 639 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 NXPH1P58417 271 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 PDZK1IP1Q13113 114 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 GIT2Q14161 759 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 TBC1D25Q3MII6 688 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 LRRC73Q5JTD7 316 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 DCAF12L2Q5VW00 463 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 KCTD11Q693B1 232 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 PM20D1Q6GTS8 502 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF474Q6S9Z5 364 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 TRIM74Q86UV6 250 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms