RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ABCA4P78363 2273 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 FN1P02751 2386 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CCDC78A2IDD5 438 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 TRIM49BA6NDI0 452 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 NPIPB15A6NHN6 443 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 FAM171A2A8MVW0 826 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 P4HA2O15460 535 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZWINTO95229 277 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 HEXAP06865 529 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CYP2A7P20853 494 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ADRA1BP35368 520 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 KRT9P35527 623 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CASP2P42575 452 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 SCNN1BP51168 640 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ADCY2Q08462 1091 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 PIN1Q13526 163 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ATRQ13535 2644 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 PCOLCEQ15113 449 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CDO1Q16878 200 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 GFOD2Q3B7J2 385 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 MLIPQ5VWP3 458 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CES4AQ5XG92 561 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CCDC70Q6NSX1 233 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 TRIM72Q6ZMU5 477 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 USP45Q70EL2 814 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 BNIPLQ7Z465 357 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 OR1N1Q8NGS0 311 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 LMO3Q8TAP4 145 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 CA5BP1Q8WTZ4 195 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 SCAMP4Q969E2 229 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 SNX21Q969T3 373 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 MAGED4Q96JG8 741 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 TREX2Q9BQ50 279 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 TRIM56Q9BRZ2 755 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 PDFQ9HBH1 243 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 UBE2TQ9NPD8 197 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 PLCB1Q9NQ66 1216 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 KLC4Q9NSK0 619 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZNF624Q9P2J8 865 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 TINAGQ9UJW2 476 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 SIK3Q9Y2K2 1263 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 RTTNQ86VV8 2226 aa9.35□□□□□ -0.91
SMARCAL1-213ENST00000496037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 WASH4PA8MWX3 477 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 J3KR12 359 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 AKAP10O43572 662 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 PRAMEF11O60813 436 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 PMPCBO75439 489 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 KLF7O75840 302 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZBTB11O95625 1053 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 CRYABP02511 175 aaKnown RBP9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 INHBBP09529 407 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 TNFAIP3P21580 790 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 PCSK6P29122 969 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 CLCNKAP51800 687 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ADAM8P78325 824 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ARG2P78540 354 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ABRQ12979 859 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 C3AR1Q16581 482 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 INSCQ1MX18 579 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 PRAMEF13Q5VWM6 474 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 NXPE4Q6UWF7 544 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ENOSF1Q7L5Y1 443 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 TECPR1Q7Z6L1 1165 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 TSPAN33Q86UF1 283 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ALPK1Q96QP1 1244 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 TAAR6Q96RI8 345 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 CATSPERBQ9H7T0 1116 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 PPCSQ9HAB8 311 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 SLC40A1Q9NP59 571 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 NDOR1Q9UHB4 597 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 ST6GALNAC2Q9UJ37 374 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 EDARQ9UNE0 448 aa9.34□□□□□ -0.91
SMARCAL1-213ENST00000496037 CACNA1CQ13936 2221 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 OR52A4PA6NMU1 304 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 GOLGA8SH3BPF8 625 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 AGPSO00116 658 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 HTRA2O43464 458 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 SOCS5O75159 536 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 CD63P08962 238 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 DNASE1P24855 282 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 NSUN2Q08J23 767 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 PLA2G4EQ3MJ16 856 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 CCDC40Q4G0X9 1142 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 TDRD12Q587J7 1177 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 ICE2Q659A1 982 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 LRRC66Q68CR7 880 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 ISLR2Q6UXK2 745 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 LINC00696Q6ZRV3 163 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 RFLNAQ6ZTI6 216 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 B4GALNT4Q76KP1 1039 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 PPP1R32Q7Z5V6 425 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 SMYD4Q8IYR2 804 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 UMODL1-AS1Q8N2C9 162 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 CATSPER1Q8NEC5 780 aa9.33□□□□□ -0.92
SMARCAL1-213ENST00000496037 OR2Y1Q8NGV0 311 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms