RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 RALBP1Q15311 655 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 KIAA1644Q3SXP7 199 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 HYIQ5T013 277 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 ARHGAP17Q68EM7 881 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 PLD3Q8IV08 490 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 RPAP2Q8IXW5 612 aaPredicted RBP4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 OR2T12Q8NG77 320 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 WDR20Q8TBZ3 569 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 TMEM143Q96AN5 459 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 NSL1Q96IY1 281 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 ASCL2Q99929 193 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 RTN4RQ9BZR6 473 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 HRH4Q9H3N8 390 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 HHATLQ9HCP6 504 aa4.84□□□□□ -1.63
NCKAP1-208ENST00000495619 FLT1P17948 1338 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 MITFO75030 526 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 RSL1D1O76021 490 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 TSHBP01222 138 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 ITGA3P26006 1051 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 ARSEP51690 589 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 CLNS1AP54105 237 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 EIF5P55010 431 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 MFAP4P55083 255 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 ITGA9Q13797 1035 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 DENND5BQ6ZUT9 1274 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 SH2D5Q6ZV89 423 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 INTS8Q75QN2 995 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 APLFQ8IW19 511 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 CTCFLQ8NI51 663 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 TBC1D16Q8TBP0 767 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 TMEM190Q8WZ59 177 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 FAM81BQ96LP2 452 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 C2orf42Q9NWW7 574 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 KCNJ14Q9UNX9 436 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 RABGAP1Q9Y3P9 1069 aa4.83□□□□□ -1.64
NCKAP1-208ENST00000495619 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 OR6C76A6NM76 312 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 B4DLN1 442 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 PLOD2O00469 737 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 VILLO15195 856 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 PTP4A3O75365 173 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 VPREB1P12018 145 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 CBLP22681 906 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 NMBRP28336 390 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 TM4SF1P30408 202 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 MRPL12P52815 198 aaKnown RBP4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 TAF13Q15543 124 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 ZNF790Q6PG37 636 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 ISCA2Q86U28 154 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 TRIM58Q8NG06 486 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 CEP295NLQ96MC4 621 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 SLC22A12Q96S37 553 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 PAG1Q9NWQ8 432 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 TAS2R14Q9NYV8 317 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 KIF26BQ2KJY2 2108 aa4.82□□□□□ -1.64
NCKAP1-208ENST00000495619 SH2B2O14492 632 aaPredicted RBP4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 TSPAN9O75954 239 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 EML2O95834 649 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 EDN1P05305 212 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 GNB3P16520 340 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 GNB1P62873 340 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 MFSD6Q6ZSS7 791 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 ZNF554Q86TJ5 538 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 DDHD1Q8NEL9 900 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 DAZLQ92904 295 aaKnown RBP4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 LRRC59Q96AG4 307 aaKnown RBP4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 SGK494Q96LW2 274 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 TREX2Q9BQ50 279 aaPredicted RBP4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 SRSF8Q9BRL6 282 aaKnown RBP4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 OSGEPL1Q9H4B0 414 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 ARHGEF38Q9NXL2 777 aa4.81□□□□□ -1.64
NCKAP1-208ENST00000495619 IGKV3D-15A0A087WSY6 115 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 PRR32B1ATL7 298 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 SLCO1B7G3V0H7 640 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 SSX4O60224 188 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 GCNT3O95395 438 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 CLPTM1O96005 669 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 GJA1P17302 382 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 THOP1P52888 689 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 CDH11P55287 796 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 FAM98BQ52LJ0 330 aaKnown RBP4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 PLEKHS1Q5SXH7 462 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 TMCO3Q6UWJ1 677 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 SLC47A1Q96FL8 570 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 ZNF582Q96NG8 517 aaPredicted RBP4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 PSD3Q9NYI0 1048 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 FLRT3Q9NZU0 649 aa4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 ZNF215Q9UL58 517 aaPredicted RBP4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 SPIN1Q9Y657 262 aaPredicted RBP4.8□□□□□ -1.64
NCKAP1-208ENST00000495619 STK36Q9NRP7 1315 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 A0A1W2PRB8 838 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 MAGEB17A8MXT2 336 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 MMP9P14780 707 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 PRLRP16471 622 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 MAPK4P31152 587 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 MAP2K2P36507 400 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 HADHAP40939 763 aa4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 GARSP41250 739 aaKnown RBP4.79□□□□□ -1.64
NCKAP1-208ENST00000495619 TMF1P82094 1093 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms