RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 IFT81Q8WYA0 676 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 TMEM159Q96B96 161 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 C12orf66Q96MD2 445 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 GFM1Q96RP9 751 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 FAM129AQ9BZQ8 928 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 PHACTR1Q9C0D0 580 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 TSPYL1Q9H0U9 437 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 FBXO6Q9NRD1 293 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 POT1Q9NUX5 634 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 IMP3Q9NV31 184 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 KCNK4Q9NYG8 393 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 SCHIP1Q9P0W5 487 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 CLCA2Q9UQC9 943 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 WDR37Q9Y2I8 494 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 COLEC10Q9Y6Z7 277 aa11.84□□□□□ -0.51
CSNK1E-213ENST00000495232 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 HYAL3O43820 417 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 TCEA3O75764 348 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 APOA4P06727 396 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 BRAFP15056 766 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 CHRM3P20309 590 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC19A1P41440 591 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 CSE1LP55060 971 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 ADARP55265 1226 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 OR1D5P58170 312 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 CCL7P80098 99 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 GPLD1P80108 840 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 HSPA14Q0VDF9 509 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 FASTKD3Q14CZ7 662 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 TRADDQ15628 312 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 RPE65Q16518 533 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 AMZ1Q400G9 498 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 RBM44Q6ZP01 1051 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 OTOAQ7RTW8 1153 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 ZNF438Q7Z4V0 828 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 SPRED1Q7Z699 444 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 DENND6AQ8IWF6 608 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 UNC5BQ8IZJ1 945 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 OR10G6Q8NH81 332 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 SEC14L1Q92503 715 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 LPGAT1Q92604 370 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 DEPDC7Q96QD5 511 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 P2RY12Q9H244 342 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 LRRN3Q9H3W5 708 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 ZFATQ9P243 1243 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 ZNF624Q9P2J8 865 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 DMGDHQ9UI17 866 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 FBXO5Q9UKT4 447 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 COMMD10Q9Y6G5 202 aa11.83□□□□□ -0.52
CSNK1E-213ENST00000495232 IQCF5A8MTL0 148 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 DUX1O43812 170 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 S1PR4O95977 384 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 MT-CO3P00414 261 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 MTHFD1P11586 935 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 PKMP14618 531 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 AMD1P17707 334 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 NDUFS1P28331 727 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 MAGEA4P43358 317 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 MAPK9P45984 424 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 PREPP48147 710 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 CD151P48509 253 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 UBE2IP63279 158 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 FOXK2Q01167 660 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 MGAT5Q09328 741 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 CBLBQ13191 982 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 FRG1Q14331 258 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 NR1D2Q14995 579 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 PLCL1Q15111 1095 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 STEAP4Q687X5 459 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 ZDHHC24Q6UX98 284 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 CAPN12Q6ZSI9 719 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 KIAA0408Q6ZU52 694 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 C3orf62Q6ZUJ4 267 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 PIM3Q86V86 326 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 ZNF761Q86XN6 746 aaPredicted RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 KRT222Q8N1A0 295 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 LILRA3Q8N6C8 439 aaPredicted RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 C2CD4AQ8NCU7 369 aaPredicted RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 CDKL2Q92772 493 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 FERD3LQ96RJ6 166 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 INSM2Q96T92 566 aaPredicted RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 SCNM1Q9BWG6 230 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 EPB41L1Q9H4G0 881 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 L2HGDHQ9H9P8 463 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 UCK1Q9HA47 277 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC40A1Q9NP59 571 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 CFAP20Q9Y6A4 193 aaKnown RBP11.82□□□□□ -0.52
CSNK1E-213ENST00000495232 RP1P56715 2156 aa11.81□□□□□ -0.52
CSNK1E-213ENST00000495232 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC5A10A0PJK1 596 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms