RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CYP4F12Q9HCS2 524 aa16.03■□□□□ 0.16
CBX4-204ENST00000495122 ZDHHC3Q9NYG2 299 aa16.03■□□□□ 0.16
CBX4-204ENST00000495122 BAIAP2L1Q9UHR4 511 aa16.03■□□□□ 0.16
CBX4-204ENST00000495122 TRAF6Q9Y4K3 522 aa16.03■□□□□ 0.16
CBX4-204ENST00000495122 IGLV3-16A0A075B6K0 115 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.02■□□□□ 0.16
CBX4-204ENST00000495122 SUPT3HB4E1H0 165 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 QSOX1O00391 747 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 BTN3A1O00481 513 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 SDHDO14521 159 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 NIPSNAP2O75323 286 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 SUPT3HO75486 399 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 TM7SF2O76062 418 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 KAT7O95251 611 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 CISD3P0C7P0 127 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 COX4I1P13073 169 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 ENO3P13929 434 aaPredicted RBP16.02■□□□□ 0.16
CBX4-204ENST00000495122 PGM1P36871 562 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 CDKN1CP49918 316 aaPredicted RBP16.02■□□□□ 0.16
CBX4-204ENST00000495122 ST8SIA6P61647 398 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 E2F5Q15329 346 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 PLA2G2CQ5R387 149 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 VWA5B1Q5TIE3 1220 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 LRRC66Q68CR7 880 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 CHSY3Q70JA7 882 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 ZSWIM9Q86XI8 627 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 GPSM1Q86YR5 675 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 RBM15BQ8NDT2 890 aaKnown RBP16.02■□□□□ 0.16
CBX4-204ENST00000495122 PHF21BQ96EK2 531 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 LINGO1Q96FE5 620 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 OR52B2Q96RD2 323 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 NUF2Q9BZD4 464 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 SPATS2LQ9NUQ6 558 aaKnown RBP16.02■□□□□ 0.16
CBX4-204ENST00000495122 PCDHGA5Q9Y5G8 931 aa16.02■□□□□ 0.16
CBX4-204ENST00000495122 PCDH15Q96QU1 1955 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 UPK3BL1B0FP48 263 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 UPK3BL2E5RIL1 263 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 E9PBE3 544 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 UBXN8O00124 270 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 KPNA5O15131 536 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 GDF9O60383 454 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 OR1I1O60431 355 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 KLHL41O60662 606 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 SNX2O60749 519 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 CIB2O75838 187 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 S100BP04271 92 aaPredicted RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 UGT2B4P06133 528 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 ZNF806P0C7X5 589 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 HNRNPLP14866 589 aaKnown RBP eCLIP16.01■□□□□ 0.15
CBX4-204ENST00000495122 KIR2DL1P43626 348 aaPredicted RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 KCNC1P48547 511 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 DGKEP52429 567 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 MXRA7P84157 204 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 ARHGEF7Q14155 803 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 SF3A2Q15428 464 aaKnown RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 TSNQ15631 228 aaKnown RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 CCDC6Q16204 474 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 TRMT5Q32P41 509 aaKnown RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 Q6ZVU0 165 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 NET1Q7Z628 596 aaPredicted RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 MYO1HQ8N1T3 1032 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 PELI3Q8N2H9 469 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 IL17RCQ8NAC3 791 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 SIDT2Q8NBJ9 832 aaKnown RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 ZNF483Q8TF39 744 aaPredicted RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 COPS8Q99627 209 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 TPSD1Q9BZJ3 242 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 UNKQ9C0B0 810 aaKnown RBP16.01■□□□□ 0.15
CBX4-204ENST00000495122 KCTD5Q9NXV2 234 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 IL36AQ9UHA7 158 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 SLCO3A1Q9UIG8 710 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 PLA2G4CQ9UP65 541 aa16.01■□□□□ 0.15
CBX4-204ENST00000495122 GON4LQ3T8J9 2241 aa16■□□□□ 0.15
CBX4-204ENST00000495122 ASCC3Q8N3C0 2202 aaKnown RBP16■□□□□ 0.15
CBX4-204ENST00000495122 DCDC2BA2VCK2 349 aa16■□□□□ 0.15
CBX4-204ENST00000495122 PSMD11O00231 422 aa16■□□□□ 0.15
CBX4-204ENST00000495122 AZIN1O14977 448 aa16■□□□□ 0.15
CBX4-204ENST00000495122 RAD51BO15315 384 aa16■□□□□ 0.15
CBX4-204ENST00000495122 TULP3O75386 442 aa16■□□□□ 0.15
CBX4-204ENST00000495122 AP2A2O94973 939 aa16■□□□□ 0.15
CBX4-204ENST00000495122 KLF8O95600 359 aaPredicted RBP16■□□□□ 0.15
CBX4-204ENST00000495122 PIK3R1P27986 724 aa16■□□□□ 0.15
CBX4-204ENST00000495122 EPHA3P29320 983 aa16■□□□□ 0.15
CBX4-204ENST00000495122 GKP32189 559 aa16■□□□□ 0.15
CBX4-204ENST00000495122 TIE1P35590 1138 aa16■□□□□ 0.15
CBX4-204ENST00000495122 CPOXP36551 454 aa16■□□□□ 0.15
CBX4-204ENST00000495122 MPLP40238 635 aa16■□□□□ 0.15
CBX4-204ENST00000495122 GRIA2P42262 883 aa16■□□□□ 0.15
CBX4-204ENST00000495122 TNFRSF4P43489 277 aa16■□□□□ 0.15
CBX4-204ENST00000495122 CCR10P46092 362 aa16■□□□□ 0.15
CBX4-204ENST00000495122 SPINT3P49223 89 aa16■□□□□ 0.15
CBX4-204ENST00000495122 LIMK1P53667 647 aa16■□□□□ 0.15
CBX4-204ENST00000495122 PKNOX1P55347 436 aa16■□□□□ 0.15
CBX4-204ENST00000495122 BTKQ06187 659 aa16■□□□□ 0.15
CBX4-204ENST00000495122 SQLEQ14534 574 aa16■□□□□ 0.15
CBX4-204ENST00000495122 PCBP2Q15366 365 aaKnown RBP eCLIP16■□□□□ 0.15
CBX4-204ENST00000495122 CHRNA6Q15825 494 aa16■□□□□ 0.15
CBX4-204ENST00000495122 PDCD2Q16342 344 aaPredicted RBP16■□□□□ 0.15
CBX4-204ENST00000495122 PFKFB4Q16877 469 aa16■□□□□ 0.15
CBX4-204ENST00000495122 PREPLQ4J6C6 727 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms