RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 EPB41L1Q9H4G0 881 aa14.05□□□□□ -0.16
SCAP-213ENST00000494938 COG4Q9H9E3 785 aa14.05□□□□□ -0.16
SCAP-213ENST00000494938 PKD1L2Q7Z442 2459 aa14.05□□□□□ -0.16
SCAP-213ENST00000494938 NBEAQ8NFP9 2946 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 MAGEB16A2A368 324 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 SDR42E2A6NKP2 422 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 HGSO14964 777 aaPredicted RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 ITGA2BP08514 1039 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 GSTM1P09488 218 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 FGF3P11487 239 aaPredicted RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 MLLT3P42568 568 aaPredicted RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 MAGEA3P43357 314 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 GSTM4Q03013 218 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 PTK6Q13882 451 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 PPP1R7Q15435 360 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 RNASEH2BQ5TBB1 312 aaKnown RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 ARMC3Q5W041 872 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 DUS1LQ6P1R4 473 aaKnown RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 ZFPM2Q8WW38 1151 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 JPH3Q8WXH2 748 aaPredicted RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCAP-213ENST00000494938 SIGLEC10Q96LC7 697 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 C12orf66Q96MD2 445 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 TRIM56Q9BRZ2 755 aaKnown RBP14.04□□□□□ -0.16
SCAP-213ENST00000494938 THSD1Q9NS62 852 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 CATSPERZQ9NTU4 200 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 PISDQ9UG56 409 aa14.04□□□□□ -0.16
SCAP-213ENST00000494938 SLC5A10A0PJK1 596 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 A8MU76 341 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 VAPBO95292 243 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 C9P02748 559 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 JMJD7P0C870 316 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 AMD1P17707 334 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 SLC5A2P31639 672 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 PREPP48147 710 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 GFERP55789 205 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 RPA4Q13156 261 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 ANKRD20A4Q4UJ75 823 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 SNAP47Q5SQN1 464 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 NAPRTQ6XQN6 538 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 TMEM135Q86UB9 458 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 PLXDC1Q8IUK5 500 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 KLHL7Q8IXQ5 586 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 PPIL6Q8IXY8 311 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 HNRNPLLQ8WVV9 542 aaKnown RBP14.03□□□□□ -0.16
SCAP-213ENST00000494938 RSC1A1Q92681 617 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 USP7Q93009 1102 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 TTC1Q99614 292 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 P2RY12Q9H244 342 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 VPS37BQ9H9H4 285 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 XAB2Q9HCS7 855 aaKnown RBP14.03□□□□□ -0.16
SCAP-213ENST00000494938 IMP3Q9NV31 184 aaKnown RBP14.03□□□□□ -0.16
SCAP-213ENST00000494938 OCIAD1Q9NX40 245 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 RNF14Q9UBS8 474 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 EPHA6Q9UF33 1036 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 PCDHGA7Q9Y5G6 932 aa14.03□□□□□ -0.16
SCAP-213ENST00000494938 CHD6Q8TD26 2715 aa14.02□□□□□ -0.16
SCAP-213ENST00000494938 URB1O60287 2271 aaKnown RBP14.02□□□□□ -0.16
SCAP-213ENST00000494938 MYLKQ15746 1914 aa14.02□□□□□ -0.16
SCAP-213ENST00000494938 MN1Q10571 1320 aaPredicted RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 FAM237BA0A1B0GVD1 139 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 IQCF5A8MTL0 148 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 C9orf172C9J069 976 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 BHMG1C9JSJ3 638 aaPredicted RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 GOLGA8KD6RF30 607 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 GOLGA8TH3BQL2 631 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 QSOX1O00391 747 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 DNALI1O14645 258 aaPredicted RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 NVLO15381 856 aaKnown RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 CAPN5O15484 640 aaPredicted RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 SLC35G4P0C7Q5 338 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 OR56A5P0C7T3 313 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 ITPKBP27987 946 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 ACADLP28330 430 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 CCR7P32248 378 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 PAFAH1B1P43034 410 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 LEPRP48357 1165 aaKnown RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 CD151P48509 253 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 PPM1FP49593 454 aaPredicted RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 ETF1P62495 437 aaKnown RBP14.02□□□□□ -0.17
SCAP-213ENST00000494938 C19orf48Q6RUI8 117 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 BMPERQ8N8U9 685 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 AGBL5Q8NDL9 886 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 PHC3Q8NDX5 983 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 C9orf72Q96LT7 481 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 DCBLD2Q96PD2 775 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 CARD6Q9BX69 1037 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 RAB33BQ9H082 229 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 KIR3DX1Q9H7L2 352 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 SLC24A2Q9UI40 661 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 ANAPC5Q9UJX4 755 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 COLEC10Q9Y6Z7 277 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 ACACAQ13085 2346 aa14.02□□□□□ -0.17
SCAP-213ENST00000494938 UNC13CQ8NB66 2214 aa14.01□□□□□ -0.17
SCAP-213ENST00000494938 ZCWPW2A0A1B0GU75 182 aa14.01□□□□□ -0.17
SCAP-213ENST00000494938 B4E171 279 aa14.01□□□□□ -0.17
SCAP-213ENST00000494938 PRMT5O14744 637 aaPredicted RBP14.01□□□□□ -0.17
SCAP-213ENST00000494938 LIN7AO14910 233 aaPredicted RBP14.01□□□□□ -0.17
SCAP-213ENST00000494938 RRP8O43159 456 aaKnown RBP14.01□□□□□ -0.17
SCAP-213ENST00000494938 KIF1CO43896 1103 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms