RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 WDR74Q6RFH5 385 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 ZNF574Q6ZN55 896 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 HOOK3Q86VS8 718 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 JAMLQ86YT9 394 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 PLXDC1Q8IUK5 500 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 RCBTB1Q8NDN9 531 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 SPDYE1Q8NFV5 336 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 ELMO1Q92556 727 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 TMEM159Q96B96 161 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 ZNF669Q96BR6 464 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 C16orf45Q96MC5 204 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 MARCH4Q9P2E8 410 aaPredicted RBP15.59■□□□□ 0.09
LIME1-209ENST00000494776 LOXL2Q9Y4K0 774 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 PCDHGA8Q9Y5G5 932 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 HEBP2Q9Y5Z4 205 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 COLEC10Q9Y6Z7 277 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 AKAP13Q12802 2813 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 KNTC1P50748 2209 aa15.59■□□□□ 0.09
LIME1-209ENST00000494776 IGF2RP11717 2491 aa15.58■□□□□ 0.09
LIME1-209ENST00000494776 FAM237BA0A1B0GVD1 139 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 UBA6A0AVT1 1052 aaPredicted RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 A8MU76 341 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 GOLGA8KD6RF30 607 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 GOLGA8TH3BQL2 631 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 ITGB6P18564 788 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 CSTF2P33240 577 aaKnown RBP eCLIP15.58■□□□□ 0.08
LIME1-209ENST00000494776 CFHR1Q03591 330 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 RPA4Q13156 261 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 TRA2AQ13595 282 aaKnown RBP eCLIP15.58■□□□□ 0.08
LIME1-209ENST00000494776 THOC5Q13769 683 aaKnown RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 BOP1Q14137 746 aaKnown RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 DNAJC21Q5F1R6 531 aaKnown RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 PTRHD1Q6GMV3 140 aaKnown RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 KIAA0930Q6ICG6 404 aaPredicted RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 GPR150Q8NGU9 434 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 ZNF578Q96N58 590 aaPredicted RBP15.58■□□□□ 0.08
LIME1-209ENST00000494776 FERD3LQ96RJ6 166 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 TRIM51Q9BSJ1 452 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 TRIM31Q9BZY9 425 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 THSD1Q9NS62 852 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 TMEM9Q9P0T7 183 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 PISDQ9UG56 409 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 KLHL3Q9UH77 587 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 RAXQ9Y2V3 346 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 RPS6KL1Q9Y6S9 549 aa15.58■□□□□ 0.08
LIME1-209ENST00000494776 COL27A1Q8IZC6 1860 aaPredicted RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 A0A1W2PNU3 283 aaPredicted RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 PMS2P1A4D2B8 440 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 TAF4O00268 1085 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 PRMT5O14744 637 aaPredicted RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 LIN7AO14910 233 aaPredicted RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 THRAP10827 490 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 HGFP14210 728 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 NDUFS1P28331 727 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 PREPP48147 710 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 TBC1D25Q3MII6 688 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 ANKRD20A4Q4UJ75 823 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 CAPRIN2Q6IMN6 1127 aaKnown RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 DUS1LQ6P1R4 473 aaKnown RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 KLHL35Q6PF15 583 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 SPATA4Q8NEY3 305 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 JPH3Q8WXH2 748 aaPredicted RBP15.57■□□□□ 0.08
LIME1-209ENST00000494776 FGF11Q92914 225 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 STAMBPL1Q96FJ0 436 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 RMDN2Q96LZ7 410 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 SLC46A1Q96NT5 459 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 DCBLD2Q96PD2 775 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 GNPTGQ9UJJ9 305 aa15.57■□□□□ 0.08
LIME1-209ENST00000494776 UNC13CQ8NB66 2214 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 FRYQ5TBA9 3013 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 SRRM3A6NNA2 597 aaPredicted RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 EFCAB8A8MWE9 144 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 SMAPO00193 183 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 HGSO14964 777 aaPredicted RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 DXOO77932 396 aaKnown RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 USP1O94782 785 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 ITGA2BP08514 1039 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 ARNTP27540 789 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 PDHA2P29803 388 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 MAGEA3P43357 314 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 CD151P48509 253 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 MAPK10P53779 464 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 CSE1LP55060 971 aaKnown RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 EIF3BP55884 814 aaKnown RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 ERVPABLB-1P60509 514 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 PLOD1Q02809 727 aaPredicted RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 C2orf54Q08AI8 447 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 C16orf72Q14CZ0 275 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 MORF4L2Q15014 288 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 BBS9Q3SYG4 887 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 RNF187Q5TA31 235 aaPredicted RBP15.56■□□□□ 0.08
LIME1-209ENST00000494776 NEPROQ6NW34 567 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 NAPRTQ6XQN6 538 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 MAATS1Q7Z4T9 603 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 LRRC6Q86X45 466 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 PDIK1LQ8N165 341 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 AGBL5Q8NDL9 886 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 ZFPM2Q8WW38 1151 aa15.56■□□□□ 0.08
LIME1-209ENST00000494776 ZNF592Q92610 1267 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms