RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 DDX3YO15523 660 aaKnown RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 SUV39H1O43463 412 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 PPFIA2O75334 1257 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 SPAG6O75602 509 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 WISP1O95388 367 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 FTCDO95954 541 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 FGF5P12034 268 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 NR1D1P20393 614 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 MSH3P20585 1137 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 PRLHRP49683 370 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 RWDD2BP57060 319 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 KLF1Q13351 362 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 MAP7Q14244 749 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 PLCL1Q15111 1095 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 BCL7AQ4VC05 210 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 KCTD11Q693B1 232 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 C16orf46Q6P387 395 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 DARS2Q6PI48 645 aaKnown RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 RBM12BQ8IXT5 1001 aaKnown RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 NXPE1Q8N323 547 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 TAB3Q8N5C8 712 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 ESX1Q8N693 406 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 KIAA1143Q96AT1 154 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-208ENST00000494728 SLC41A2Q96JW4 573 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 C12orf66Q96MD2 445 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 TBL1YQ9BQ87 522 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 EFR3BQ9Y2G0 817 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 CENPEQ02224 2701 aa11.37□□□□□ -0.59
VTI1A-208ENST00000494728 MGAT4DA6NG13 374 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 C2orf81A6NN90 581 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 K7EM74 188 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 MC4RP32245 332 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 DLSTP36957 453 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 KPNA2P52292 529 aaKnown RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 TUBB3Q13509 450 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 LONRF2Q1L5Z9 754 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 SKIDA1Q1XH10 827 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 DEFB109BQ30KR1 87 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 DNTTIP2Q5QJE6 756 aaKnown RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 PWWP2BQ6NUJ5 590 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 C6orf15Q6UXA7 325 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 TMTC1Q8IUR5 882 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 RASGRP3Q8IV61 690 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 PIANPQ8IYJ0 282 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 FAM71DQ8N9W8 422 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 OR2L2Q8NH16 312 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 CT55Q8WUE5 264 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 ATG4AQ8WYN0 398 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 ZDHHC12Q96GR4 267 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 EPN3Q9H201 632 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 ADNPQ9H2P0 1102 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 ZNF71Q9NQZ8 489 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 SLC24A2Q9UI40 661 aa11.36□□□□□ -0.59
VTI1A-208ENST00000494728 HEMK1Q9Y5R4 338 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 DNMT3AQ9Y6K1 912 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-208ENST00000494728 IGLV3-16A0A075B6K0 115 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 TRBV5-4A0A0C4DH59 114 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CCDC78A2IDD5 438 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 TLCD2A6NGC4 264 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 KCNJ13O60928 360 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 POLBP06746 335 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 TPH1P17752 444 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 TCN2P20062 427 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CCR10P46092 362 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 LAMB3Q13751 1172 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 IL11RAQ14626 422 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 PRAMEF17Q5VTA0 474 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 PPP1R3BQ86XI6 285 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CLDN19Q8N6F1 224 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 HM13Q8TCT9 377 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 STAMBPL1Q96FJ0 436 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 ZNF514Q96K75 400 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 LINC00615Q96LM1 132 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CATSPER2Q96P56 530 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 TRIT1Q9H3H1 467 aaKnown RBP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CLMPQ9H6B4 373 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 KIR3DX1Q9H7L2 352 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 ARNT2Q9HBZ2 717 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 HRASLS2Q9NWW9 162 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 CRLS1Q9UJA2 301 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 AAR2Q9Y312 384 aaKnown RBP11.35□□□□□ -0.59
VTI1A-208ENST00000494728 KCNMB2Q9Y691 235 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 NUP210LQ5VU65 1888 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
VTI1A-208ENST00000494728 TEX15Q9BXT5 2789 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 OR6C74A6NCV1 312 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 OR51F1A6NGY5 319 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 TJP3O95049 919 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 CRTAMO95727 393 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 NTRK1P04629 796 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 SLC35G4P0C7Q5 338 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 ACRV1P26436 265 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms