RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 PLOD1Q02809 727 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 HSPA14Q0VDF9 509 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 OVGP1Q12889 678 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 ANGPT1Q15389 498 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 SEPT7Q16181 437 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 ALG11Q2TAA5 492 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 CCDC153Q494R4 210 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 TECRLQ5HYJ1 363 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 XKR5Q6UX68 686 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 NEK10Q6ZWH5 1172 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 AMZ2Q86W34 360 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 DCP2Q8IU60 420 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 VRK3Q8IV63 474 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 MYO1HQ8N1T3 1032 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 FSTL5Q8N475 847 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 ARMC2Q8NEN0 867 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 MGARPQ8TDB4 240 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 GLMNQ92990 594 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 TMEM159Q96B96 161 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 SCYL1Q96KG9 808 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 OR2M4Q96R27 311 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 MRPL57Q9BQC6 102 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 MRPL46Q9H2W6 279 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 COG4Q9H9E3 785 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 CARS2Q9HA77 564 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 CYP4F12Q9HCS2 524 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 C11orf16Q9NQ32 467 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 MRPL40Q9NQ50 206 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 TM7SF3Q9NS93 570 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 ZSCAN32Q9NX65 697 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 XPR1Q9UBH6 696 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 FAM8A1Q9UBU6 413 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
MCF2L-231ENST00000494043 PIKFYVEQ9Y2I7 2098 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 KMT2EQ8IZD2 1858 aa11.19□□□□□ -0.62
MCF2L-231ENST00000494043 SPTY2D1-AS1A0A0U1RR47 76 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 CCDC189A1A4V9 331 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 TK2O00142 265 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 BTN3A1O00481 513 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 POLR3GO15318 223 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 RBP1P09455 135 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 DHRS4L1P0CG22 281 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 MPC1LP0DKB6 136 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 ACP5P13686 325 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 VCLP18206 1134 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 CNR2P34972 360 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 DHPSP49366 369 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 WDR4P57081 412 aaKnown RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 DMPKQ09013 629 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 RPA4Q13156 261 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 FZD2Q14332 565 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 NFE2L1Q14494 772 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 OR4D1Q15615 310 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 PLK5Q496M5 336 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 HHATQ5VTY9 493 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 LVRNQ6Q4G3 990 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 LAYNQ6UX15 382 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 FAM83HQ6ZRV2 1179 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 CHST15Q7LFX5 561 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 ISCA2Q86U28 154 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 SLC22A15Q8IZD6 547 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 LILRA3Q8N6C8 439 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 CCDC63Q8NA47 563 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 ZBTB44Q8NCP5 570 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 RDH11Q8TC12 318 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 TSACCQ96A04 125 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 KIAA1191Q96A73 305 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 PTERQ96BW5 349 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 TFB2MQ9H5Q4 396 aaKnown RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 ALG9Q9H6U8 611 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 IKZF3Q9UKT9 509 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 PNMA8BQ9ULN7 279 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-231ENST00000494043 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 GPSM3Q9Y4H4 160 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
MCF2L-231ENST00000494043 PRR19A6NJB7 356 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 TARM1B6A8C7 271 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 H3BM21 787 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 CDC7O00311 574 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 BCAT2O15382 392 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-231ENST00000494043 KCNJ13O60928 360 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 KERAO60938 352 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 RASGRP1O95267 797 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 SBK3P0C264 359 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 ITPKAP23677 461 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 SERPINB4P48594 390 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 GYS2P54840 703 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 IRX4P78413 519 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 EIF2B5Q13144 721 aaKnown RBP11.17□□□□□ -0.62
MCF2L-231ENST00000494043 LRP8Q14114 963 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 TSNQ15631 228 aaKnown RBP11.17□□□□□ -0.62
MCF2L-231ENST00000494043 CYHR1Q6ZMK1 362 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 CEP68Q76N32 757 aa11.17□□□□□ -0.62
MCF2L-231ENST00000494043 ADAMTSL2Q86TH1 951 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms