RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	KLC2	Q9H0B6	622 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	OSGEPL1	Q9H4B0	414 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	C12orf49	Q9H741	205 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	STAP1	Q9ULZ2	295 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	MRPS7	Q9Y2R9	242 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	ARL2BP	Q9Y2Y0	163 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919		A0A087X0T9	212 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919		M0QYT0	321 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	SNX3	O60493	162 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	MYO1D	O94832	1006 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	HAUS5	O94927	633 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	FTL	P02792	175 aa	Predicted RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	KLKB1	P03952	638 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	HNRNPH3	P31942	346 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	SCNN1A	P37088	669 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	MATK	P42679	507 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	DIO1	P49895	249 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	CDKN1C	P49918	316 aa	Predicted RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	PSMD4	P55036	377 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	GALK2	Q01415	458 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	CALCOCO2	Q13137	446 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	ELOA	Q14241	798 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	OXA1L	Q15070	435 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	PFKFB4	Q16877	469 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	CDO1	Q16878	200 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	SAPCD1	Q5SSQ6	148 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	ARSK	Q6UWY0	536 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	TPGS1	Q6ZTW0	290 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	HTR3D	Q70Z44	454 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	TC2N	Q8N9U0	490 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	JOSD2	Q8TAC2	188 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	TP53INP1	Q96A56	240 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	SLC6A15	Q9H2J7	730 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	TBC1D17	Q9HA65	648 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	SUCO	Q9UBS9	1254 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	AGO1	Q9UL18	857 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	NDRG2	Q9UN36	371 aa	Known RBP	11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	SAR1B	Q9Y6B6	198 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919	MAU2	Q9Y6X3	613 aa		11.45	□□□□□ -0.58
BRCA1-222	ENST00000493919		A0A1W2PQ72	361 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919		F8W8V4	182 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	TM9SF1	O15321	606 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	MAN1A2	O60476	641 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	SLITRK5	O94991	958 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	ADH1C	P00326	375 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	CLU	P10909	449 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	GM2A	P17900	193 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	TFE3	P19532	575 aa	Predicted RBP	11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	XPA	P23025	273 aa	Predicted RBP	11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	NR1H3	Q13133	447 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	UBXN2B	Q14CS0	331 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	MORF4L2	Q15014	288 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	DHCR24	Q15392	516 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	LY6G5C	Q5SRR4	150 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	DCUN1D2	Q6PH85	259 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919		Q6ZNB5	142 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	RFX8	Q6ZV50	586 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	ZNF366	Q8N895	744 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	C11orf65	Q8NCR3	313 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	OR56B2P	Q8NGI1	322 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	CHAC2	Q8WUX2	184 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	TRUB1	Q8WWH5	349 aa	Known RBP	11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	ZUFSP	Q96AP4	578 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	OTUB2	Q96DC9	234 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	SHD	Q96IW2	340 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	CHP1	Q99653	195 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	FOXQ1	Q9C009	403 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	CCDC86	Q9H6F5	360 aa	Known RBP	11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	RMND5A	Q9H871	391 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	TXNDC16	Q9P2K2	825 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	TLR6	Q9Y2C9	796 aa		11.44	□□□□□ -0.58
BRCA1-222	ENST00000493919	NEDD8-MDP1	E9PL57	170 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	MASP2	O00187	686 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	WRB	O00258	174 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	CCNK	O75909	580 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	IGLV3-25	P01717	112 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	KRT8	P05787	483 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	ADH5	P11766	374 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	NCF2	P19878	526 aa	Predicted RBP	11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	SDC4	P31431	198 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	GJA4	P35212	333 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	MAPK9	P45984	424 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	RECQL	P46063	649 aa	Predicted RBP	11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	NR1H2	P55055	460 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	PON2	Q15165	354 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	DPYSL2	Q16555	572 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	ESCO2	Q56NI9	601 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	TEX30	Q5JUR7	227 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	OTUD1	Q5VV17	481 aa	Predicted RBP	11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	GARNL3	Q5VVW2	1013 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	RNF43	Q68DV7	783 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	TRNP1	Q6NT89	227 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	UNC5A	Q6ZN44	842 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	KRT73	Q86Y46	540 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	GSPT2	Q8IYD1	628 aa	Known RBP	11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	RCOR2	Q8IZ40	523 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	NRSN1	Q8IZ57	195 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	MFSD2A	Q8NA29	543 aa		11.43	□□□□□ -0.58
BRCA1-222	ENST00000493919	LRRC20	Q8TCA0	184 aa		11.43	□□□□□ -0.58

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