RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 SPAG6O75602 509 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 TMPRSS15P98073 1019 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 MSLNQ13421 630 aaPredicted RBP23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 C16orf46Q6P387 395 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 ARHGEF18Q6ZSZ5 1173 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 PEX26Q7Z412 305 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 SNX20Q7Z614 316 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 OOSP2Q86WS3 158 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 KMT5CQ86Y97 462 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 SYCE1Q8N0S2 351 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 NXPE1Q8N323 547 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 TXLNBQ8N3L3 684 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 INSM2Q96T92 566 aaPredicted RBP23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 COPS8Q99627 209 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 TRIM4Q9C037 500 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 CLMPQ9H6B4 373 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 ARNT2Q9HBZ2 717 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 RARRES3Q9UL19 164 aa23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 MRPS18BQ9Y676 258 aaKnown RBP23.13■■□□□ 1.29
RHBDD3-206ENST00000493894 MIF4GDA9UHW6 222 aaKnown RBP23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 SUV39H1O43463 412 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 WISP1O95388 367 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 MT-ND3P03897 115 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 PRLHRP49683 370 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 ARL4DP49703 201 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 SPARCL1Q14515 664 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 DENND5AQ6IQ26 1287 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 KLHDC8BQ8IXV7 354 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 HM13Q8TCT9 377 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 HEXDCQ8WVB3 486 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 APOBEC4Q8WW27 367 aaKnown RBP23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 ZFPM2Q8WW38 1151 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 MAP3K3Q99759 626 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 BAG1Q99933 345 aaPredicted RBP23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 KIR3DX1Q9H7L2 352 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 SLC24A2Q9UI40 661 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 PCDHB3Q9Y5E6 796 aa23.12■■□□□ 1.29
RHBDD3-206ENST00000493894 UBA6A0AVT1 1052 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 TERTO14746 1132 aaKnown RBP23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 SGTAO43765 313 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 CCNYL3P0C7X3 344 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 ACY1Q03154 408 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 KCNC4Q03721 635 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 GSE1Q14687 1217 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 KCNAB1Q14722 419 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 DEFB109BQ30KR1 87 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 ATP1A1-AS1Q5TC04 95 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 ARMC6Q6NXE6 501 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 SPDYE1Q8NFV5 336 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 RMDN2Q96LZ7 410 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 CCM2Q9BSQ5 444 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 FAM96AQ9H5X1 160 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 HRASLS2Q9NWW9 162 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 PACSIN2Q9UNF0 486 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 COLEC10Q9Y6Z7 277 aa23.11■■□□□ 1.29
RHBDD3-206ENST00000493894 LDB2O43679 373 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 POLBP06746 335 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 ATP1B2P14415 290 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 FOLR1P15328 257 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 F8A1P23610 371 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 NDUFS1P28331 727 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 MC4RP32245 332 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 KIF5AQ12840 1032 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 KRT33BQ14525 404 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 PARP6Q2NL67 630 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 P3H1Q32P28 736 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 GPR33Q49SQ1 333 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 CFAP206Q8IYR0 622 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 FAM71DQ8N9W8 422 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 C9orf43Q8TAL5 461 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 DNAJC1Q96KC8 554 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 LRRC40Q9H9A6 602 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 KCND3Q9UK17 655 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 HEBP2Q9Y5Z4 205 aa23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 ASH1LQ9NR48 2969 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-206ENST00000493894 CCL22O00626 93 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 TIAF1O95411 115 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 EBLN1P0CF75 366 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 CSRP3P50461 194 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 HSD11B2P80365 405 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 SEPT6Q14141 434 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 KCTD11Q693B1 232 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 BPHLQ86WA6 291 aaPredicted RBP23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 CARFQ8N187 725 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 FCRL4Q96PJ5 515 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 VPS37BQ9H9H4 285 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 FGF21Q9NSA1 209 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 PADI1Q9ULC6 663 aa23.09■■□□□ 1.29
RHBDD3-206ENST00000493894 C17orf113A0A1B0GUU1 675 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 OR6C74A6NCV1 312 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 KATNA1O75449 491 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 FTCDO95954 541 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 KLF1Q13351 362 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 ZRANB3Q5FWF4 1079 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 CAPRIN2Q6IMN6 1127 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 PTRH1Q86Y79 214 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 TMEM139Q8IV31 216 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 LILRA3Q8N6C8 439 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 LHX9Q9NQ69 397 aa23.08■■□□□ 1.29
RHBDD3-206ENST00000493894 ZDHHC3Q9NYG2 299 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms