RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 EML2O95834 649 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 FTH1P02794 183 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 OR56A5P0C7T3 313 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 F3P13726 295 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 PLA2G2AP14555 144 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 SLC2A4P14672 509 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 IDSP22304 550 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 ARCN1P48444 511 aaKnown RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 UCNP55089 124 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 EIF3BP55884 814 aaKnown RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 NFE2L1Q14494 772 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 HLTFQ14527 1009 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTSA-209ENST00000493522 TYSND1Q2T9J0 566 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 GLE1Q53GS7 698 aaKnown RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 RNF187Q5TA31 235 aaPredicted RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 BROXQ5VW32 411 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 NEPROQ6NW34 567 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 ZDHHC24Q6UX98 284 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 UNC5AQ6ZN44 842 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 CCNJLQ8IV13 435 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 UNC5BQ8IZJ1 945 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 NAGSQ8N159 534 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 ZNF843Q8N446 348 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 LRRN4CLQ8ND94 238 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 GPR156Q8NFN8 814 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 IFI44Q8TCB0 444 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 FBXO25Q8TCJ0 367 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 HM13Q8TCT9 377 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 MAPK15Q8TD08 544 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 CALML6Q8TD86 181 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 NAT6Q93015 286 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 COL26A1Q96A83 441 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 ZNF578Q96N58 590 aaPredicted RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 DEPDC7Q96QD5 511 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 WDR83Q9BRX9 315 aaKnown RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 FAM167BQ9BTA0 163 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 SYNDIG1Q9H7V2 258 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 L2HGDHQ9H9P8 463 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 EPB41L5Q9HCM4 733 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 PRDM8Q9NQV8 689 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 FAM114A2Q9NRY5 505 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 PADI4Q9UM07 663 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 TEX264Q9Y6I9 313 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 DNMT3AQ9Y6K1 912 aaPredicted RBP11.37□□□□□ -0.59
CTSA-209ENST00000493522 PRSS21Q9Y6M0 314 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 FAM169AQ9Y6X4 670 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 TRBV23OR9-2A0A075B6M9 112 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 MGAT4DA6NG13 374 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 PRMT5O14744 637 aaPredicted RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 EIF3HO15372 352 aaKnown RBP eCLIP11.36□□□□□ -0.59
CTSA-209ENST00000493522 KCNJ13O60928 360 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 F7P08709 466 aaPredicted RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 RHOXF2BP0C7M4 288 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 ITGB6P18564 788 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 RPL10P27635 214 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 HALP42357 657 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 SLC1A2P43004 574 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 CLCNKAP51800 687 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 DRG2P55039 364 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 TMPRSS3P57727 454 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 CFHR1Q03591 330 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 DMPKQ09013 629 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 BOP1Q14137 746 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 SYTL3Q4VX76 610 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 TAF1BQ53T94 588 aaPredicted RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 HSP90AA5PQ58FG0 334 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 STEAP4Q687X5 459 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 PTRHD1Q6GMV3 140 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 FAM83HQ6ZRV2 1179 aaPredicted RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 CILP2Q8IUL8 1156 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 DENND6AQ8IWF6 608 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 TRIM48Q8IWZ4 208 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 LSMEM2Q8N112 164 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 GPR150Q8NGU9 434 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 OR2L2Q8NH16 312 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 GABPB2Q8TAK5 448 aaPredicted RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 SLC37A2Q8TED4 501 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 CCDC74AQ96AQ1 378 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 CERS2Q96G23 380 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 RHOXF2Q9BQY4 288 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 CCM2Q9BSQ5 444 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 TSSK1BQ9BXA7 367 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 STN1Q9H668 368 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 COG4Q9H9E3 785 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 PPANQ9NQ55 473 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 IARS2Q9NSE4 1012 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 MTRF1LQ9UGC7 380 aaKnown RBP11.36□□□□□ -0.59
CTSA-209ENST00000493522 GNPTGQ9UJJ9 305 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 PSMD13Q9UNM6 376 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 PCDHB1Q9Y5F3 818 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 ANKRD12Q6UB98 2062 aa11.36□□□□□ -0.59
CTSA-209ENST00000493522 KIF26BQ2KJY2 2108 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 KLHL33A6NCF5 533 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 A6NCN8 305 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 RHPN2P1A8MT19 583 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 GP1BAP07359 652 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms