RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 UGCGQ16739 394 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 TMEM266Q2M3C6 531 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 LRIT3Q3SXY7 679 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ASPRV1Q53RT3 343 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ARHGEF16Q5VV41 709 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 C19orf48Q6RUI8 117 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 IL20RBQ6UXL0 311 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 TMTC3Q6ZXV5 915 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 PRSS45Q7RTY3 260 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ANKRD33Q7Z3H0 272 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 SATL1Q86VE3 508 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 IQCA1Q86XH1 822 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 NECAB1Q8N987 351 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 NCOA7Q8NI08 942 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 MORC4Q8TE76 937 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 ARNTL2Q8WYA1 636 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 TMEM19Q96HH6 336 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 JAKMIP1Q96N16 626 aaKnown RBP3.14□□□□□ -1.91
PTCD3-218ENST00000493430 PCYT2Q99447 389 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 EGLN1Q9GZT9 426 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 FAM49AQ9H0Q0 323 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-218ENST00000493430 TTC12Q9H892 705 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-218ENST00000493430 LRRC4Q9HBW1 653 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 FBRSL1Q9HCM7 1045 aaKnown RBP3.14□□□□□ -1.91
PTCD3-218ENST00000493430 NOX4Q9NPH5 578 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 SETD4Q9NVD3 440 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 VPS54Q9P1Q0 977 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 KCNJ14Q9UNX9 436 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 DOCK9Q9BZ29 2069 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 FRMPD4Q14CM0 1322 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 NUP205Q92621 2012 aa3.14□□□□□ -1.91
PTCD3-218ENST00000493430 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 GSTTP1A0A1W2PQM5 241 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 A0A1W2PS18 150 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CCDC69A6NI79 296 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 ASB14A6NK59 587 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF587BE7ETH6 402 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 ZBTB5O15062 677 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 MID1O15344 667 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CHMP2AO43633 222 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CSDE1O75534 798 aaKnown RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 MTA2O94776 668 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 TDP2O95551 362 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 GH1P01241 217 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 AMBPP02760 352 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CSTBP04080 98 aaKnown RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 IQCF3P0C7M6 154 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 SMIM10L2AP0DMW4 78 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 SMIM10L2BP0DMW5 78 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 GHRP10912 638 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CASTP20810 708 aaKnown RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CD72P21854 359 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 SP100P23497 879 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 STX2P32856 288 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 TCF7P36402 384 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 PBX3P40426 434 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CLCN3P51790 818 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 FUT6P51993 359 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 NAPAP54920 295 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 DRP2Q13474 957 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 SLC18A3Q16572 532 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 ATP13A5Q4VNC0 1218 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CBWD5Q5RIA9 395 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 NAPEPLDQ6IQ20 393 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CES5AQ6NT32 575 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 LRRC8DQ7L1W4 858 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 EPHX4Q8IUS5 362 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 LURAP1LQ8IV03 231 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CCDC60Q8IWA6 550 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 SCFD2Q8WU76 684 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 RUBCNQ92622 972 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 RNFT2Q96EX2 444 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 SPATA33Q96N06 139 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 TTC14Q96N46 770 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 C16orf70Q9BSU1 422 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 MTG1Q9BT17 334 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 KRT23Q9C075 422 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 FTOQ9C0B1 505 aaKnown RBP eCLIP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 RNF41Q9H4P4 317 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CHODLQ9H9P2 273 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 POLD4Q9HCU8 107 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 CACNG4Q9UBN1 327 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 ADD3Q9UEY8 706 aaKnown RBP3.13□□□□□ -1.91
PTCD3-218ENST00000493430 POU2F3Q9UKI9 436 aa3.13□□□□□ -1.91
PTCD3-218ENST00000493430 TNRC6BQ9UPQ9 1833 aaKnown RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 MYO18AQ92614 2054 aaKnown RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 FAM86B1E9PN63 330 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 HAS3O00219 553 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 ZBTB43O43298 467 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SLC37A4O43826 429 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 JAK2O60674 1132 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 RFPL2O75678 378 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 NDUFB4O95168 129 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CTDNEP1O95476 244 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 CHRNA1P02708 482 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 FAM86B2P0C5J1 330 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 POLR2MP0CAP2 368 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 IL9P15248 144 aa3.12□□□□□ -1.91
PTCD3-218ENST00000493430 ZNF8P17098 575 aaPredicted RBP3.12□□□□□ -1.91
PTCD3-218ENST00000493430 SRD5A1P18405 259 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms