RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CRYMQ14894 314 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 RPE65Q16518 533 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 ISXQ2M1V0 245 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 TYSND1Q2T9J0 566 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 SPANXN3Q5MJ09 141 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 HP1BP3Q5SSJ5 553 aaPredicted RBP12.51□□□□□ -0.41
CLIP2-209ENST00000493166 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 PIM3Q86V86 326 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 LRRC6Q86X45 466 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 CILP2Q8IUL8 1156 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 RBM12BQ8IXT5 1001 aaKnown RBP12.51□□□□□ -0.41
CLIP2-209ENST00000493166 MNS1Q8NEH6 495 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 CALML6Q8TD86 181 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 GATA6Q92908 595 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 LRRC39Q96DD0 335 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 TCF12Q99081 682 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 TBC1D10AQ9BXI6 508 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 FOXP3Q9BZS1 431 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 RDH14Q9HBH5 336 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 SLC40A1Q9NP59 571 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 PCDHB1Q9Y5F3 818 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 FAM169AQ9Y6X4 670 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 DMXL2Q8TDJ6 3036 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 PRAMEF33A0A0G2JMD5 474 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 TRABD2BA6NFA1 517 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 LILRA5A6NI73 299 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 IFRD1O00458 451 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 TP73O15350 636 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 RPS3P23396 243 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 PDX1P52945 283 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 INHBCP55103 352 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 CAMK2BQ13554 666 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 GPR18Q14330 331 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 KRT33BQ14525 404 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 BRD3Q15059 726 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 CLPPQ16740 277 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 ZNF658BQ4V348 819 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 DUS1LQ6P1R4 473 aaKnown RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 UNQ6494/PRO21346Q6UXR6 183 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 B3GNT8Q7Z7M8 397 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 KCNMB4Q86W47 210 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 IGDCC3Q8IVU1 814 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 GABPB2Q8TAK5 448 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 LPGAT1Q92604 370 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 NXPE2Q96DL1 559 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 CFAP36Q96G28 342 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 ATXN7L3BQ96GX2 97 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 TMEM74Q96NL1 305 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 PANX3Q96QZ0 392 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 INSM2Q96T92 566 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 NUDT22Q9BRQ3 303 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 FAM167BQ9BTA0 163 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 STRADBQ9C0K7 418 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 P2RY12Q9H244 342 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 OR52A5Q9H2C5 316 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 EPB41L1Q9H4G0 881 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 EPB41L5Q9HCM4 733 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 INTS10Q9NVR2 710 aaKnown RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 ZC3H7BQ9UGR2 993 aaKnown RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 CHMP2BQ9UQN3 213 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 HEBP2Q9Y5Z4 205 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 TEX264Q9Y6I9 313 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 CACNA1BQ00975 2339 aa12.5□□□□□ -0.41
CLIP2-209ENST00000493166 MAP1BP46821 2468 aaKnown RBP12.5□□□□□ -0.41
CLIP2-209ENST00000493166 ADAMTS20P59510 1910 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CTAGE15A4D2H0 777 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 IQCF5A8MTL0 148 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CTAGE8P0CG41 777 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 PDHA2P29803 388 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 FMO4P31512 558 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CCKBRP32239 447 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CSF2RBP32927 897 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CSE1LP55060 971 aaKnown RBP12.49□□□□□ -0.41
CLIP2-209ENST00000493166 SLC7A5Q01650 507 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 PLOD1Q02809 727 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-209ENST00000493166 PDIA2Q13087 525 aaKnown RBP12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CTBP1Q13363 440 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 PLCL1Q15111 1095 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 TMED2Q15363 201 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 HSP90AA5PQ58FG0 334 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 PHF19Q5T6S3 580 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CAPRIN2Q6IMN6 1127 aaKnown RBP12.49□□□□□ -0.41
CLIP2-209ENST00000493166 NAPRTQ6XQN6 538 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CENPUQ71F23 418 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 TMPRSS9Q7Z410 1059 aa12.49□□□□□ -0.41
CLIP2-209ENST00000493166 CTAGE6Q86UF2 777 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms