RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 IMP3Q9NV31 184 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 INTS10Q9NVR2 710 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 FBXO5Q9UKT4 447 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 WASF3Q9UPY6 502 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 PCDHB1Q9Y5F3 818 aa13.68□□□□□ -0.22
CCM2-217ENST00000492883 CFAP20Q9Y6A4 193 aaKnown RBP13.68□□□□□ -0.22
CCM2-217ENST00000492883 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 E7ESA3 106 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 H3BMM5 538 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 NTN3O00634 580 aaPredicted RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 CASC3O15234 703 aaKnown RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCM2-217ENST00000492883 TCEA3O75764 348 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 S1PR4O95977 384 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 ESR1P03372 595 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 PDHA2P29803 388 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 SLC1A2P43004 574 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 MAPK9P45984 424 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 PREPP48147 710 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 CSE1LP55060 971 aaKnown RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 SHC2P98077 582 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 PLOD1Q02809 727 aaPredicted RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 HSPA14Q0VDF9 509 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 NR1D2Q14995 579 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 CDCP2Q5VXM1 449 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 NKAIN2Q5VXU1 208 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 CAPRIN2Q6IMN6 1127 aaKnown RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 PIM3Q86V86 326 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 RBM12BQ8IXT5 1001 aaKnown RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 CACTIN-AS1Q8N1I8 211 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 DCBLD1Q8N8Z6 715 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 OR10G6Q8NH81 332 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 FBXO25Q8TCJ0 367 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 LPGAT1Q92604 370 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 CERS2Q96G23 380 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 CCDC68Q9H2F9 335 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 SLC40A1Q9NP59 571 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 FBXO6Q9NRD1 293 aaPredicted RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 ATXN7L1Q9ULK2 861 aaPredicted RBP13.67□□□□□ -0.22
CCM2-217ENST00000492883 MSRB2Q9Y3D2 182 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 NEUROG3Q9Y4Z2 214 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 HEBP2Q9Y5Z4 205 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 COLEC10Q9Y6Z7 277 aa13.67□□□□□ -0.22
CCM2-217ENST00000492883 LAMA1P25391 3075 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 IGHV1OR21-1A0A087WYE8 117 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 PRAMEF33A0A0G2JMD5 474 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 KPNA5O15131 536 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CSO75390 466 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 CPNE6O95741 557 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 APOA4P06727 396 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 MTHFD1P11586 935 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 AMD1P17707 334 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CHRM3P20309 590 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CD1CP29017 333 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CCR7P32248 378 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CD151P48509 253 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CARSP49589 748 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 ADARP55265 1226 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 GPLD1P80108 840 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 FASTKD3Q14CZ7 662 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 MAP9Q49MG5 647 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 ZNF658BQ4V348 819 aaPredicted RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 ZNF789Q5FWF6 425 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 XKR5Q6UX68 686 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CCNI2Q6ZMN8 369 aaPredicted RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 CCDC25Q86WR0 208 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 GSDMBQ8TAX9 411 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 ASZ1Q8WWH4 475 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 RMDN2Q96LZ7 410 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 BIRC8Q96P09 236 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 FERD3LQ96RJ6 166 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 WDR83Q9BRX9 315 aaKnown RBP13.66□□□□□ -0.22
CCM2-217ENST00000492883 OR52A5Q9H2C5 316 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 UCK1Q9HA47 277 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 FAM114A2Q9NRY5 505 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CABIN1Q9Y6J0 2220 aa13.66□□□□□ -0.22
CCM2-217ENST00000492883 CEP250Q9BV73 2442 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
CCM2-217ENST00000492883 SCN8AQ9UQD0 1980 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
CCM2-217ENST00000492883 LRP4O75096 1905 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 SLC5A10A0PJK1 596 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 FAM221BA6H8Z2 402 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 D6RAR5 112 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 E5RI56 91 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 DUX1O43812 170 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 HAUS5O94927 633 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 F7P08709 466 aaPredicted RBP13.65□□□□□ -0.22
CCM2-217ENST00000492883 EPHA4P54764 986 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 MPP1Q00013 466 aa13.65□□□□□ -0.22
CCM2-217ENST00000492883 CBLBQ13191 982 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms