RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	RHOQ	P17081	205 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	LHCGR	P22888	699 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	RPL10	P27635	214 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	RGR	P47804	291 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PREP	P48147	710 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	CTSC	P53634	463 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	DCD	P81605	110 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	APBA1	Q02410	837 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	DMTN	Q08495	405 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PDCL	Q13371	301 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PNOC	Q13519	176 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF658	Q5TYW1	1059 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ISM2	Q6H9L7	571 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	MRPL14	Q6P1L8	145 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	KIRREL2	Q6UWL6	708 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM183BP	Q6ZVS7	135 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	YTHDF3	Q7Z739	585 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	SRL	Q86TD4	932 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	NLRP14	Q86W24	1093 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	HIPK1	Q86Z02	1210 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ARHGEF19	Q8IW93	802 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	GHDC	Q8N2G8	530 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	AOPEP	Q8N6M6	819 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	SIRT6	Q8N6T7	355 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	EXD1	Q8NHP7	514 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	CCDC110	Q8TBZ0	833 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	BRIX1	Q8TDN6	353 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	TMEM125	Q96AQ2	219 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PPM1M	Q96MI6	270 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	CEP63	Q96MT8	703 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	TIGD1	Q96MW7	591 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	KCTD15	Q96SI1	283 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	NPY6R	Q99463	290 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	AMBRA1	Q9C0C7	1298 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ABCG8	Q9H221	673 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	NOL6	Q9H6R4	1146 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	RMI1	Q9H9A7	625 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ACP6	Q9NPH0	428 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PLCB1	Q9NQ66	1216 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	TMEM248	Q9NWD8	314 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	HRASLS2	Q9NWW9	162 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	VPS18	Q9P253	973 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	UBA2	Q9UBT2	640 aa	Predicted RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	TRIM10	Q9UDY6	481 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ADGRE2	Q9UHX3	823 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	NOCT	Q9UK39	431 aa	Known RBP	5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	STAP1	Q9ULZ2	295 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	DNAJC16	Q9Y2G8	782 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	CCDC88C	Q9P219	2028 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	NBEAL2	Q6ZNJ1	2754 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	OR5K3	A6NET4	321 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CLDN4	O14493	209 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	TRAFD1	O14545	582 aa	Predicted RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	P4HA2	O15460	535 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	SMPD2	O60906	423 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PYGL	P06737	847 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CYP2A6	P11509	494 aa	Predicted RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	MX2	P20592	715 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	SOX11	P35716	441 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CLCNKA	P51800	687 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	DRG2	P55039	364 aa	Known RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	SRSF2	Q01130	221 aa	Known RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PTPRR	Q15256	657 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	INSC	Q1MX18	579 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CHRFAM7A	Q494W8	412 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	FILIP1L	Q4L180	1135 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	TDRD12	Q587J7	1177 aa	Known RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF766	Q5HY98	468 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CATSPERE	Q5SY80	951 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	ARMC6	Q6NXE6	501 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	C11orf57	Q6ZUT1	292 aa	Predicted RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	ENOSF1	Q7L5Y1	443 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	TSPAN33	Q86UF1	283 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CD163	Q86VB7	1156 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PAQR7	Q86WK9	346 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CXorf67	Q86X51	503 aa	Predicted RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM131B	Q86XD5	332 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	FAM20C	Q8IXL6	584 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	KBTBD2	Q8IY47	623 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	GPR135	Q8IZ08	494 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PPM1K	Q8N3J5	372 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PPM1N	Q8N819	430 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	TSEN2	Q8NCE0	465 aa	Known RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PGAP3	Q96FM1	320 aa	Predicted RBP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	SEC16B	Q96JE7	1060 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	VPS50	Q96JG6	964 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	NSMCE3	Q96MG7	304 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CPXM1	Q96SM3	734 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	TBCB	Q99426	244 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	AP1M1	Q9BXS5	423 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PDCL3	Q9H2J4	239 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	SYNC	Q9H7C4	482 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	PLEKHF2	Q9H8W4	249 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	LRTM1	Q9HBL6	345 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF160	Q9HCG1	818 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	SYTL2	Q9HCH5	934 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	OR12D3	Q9UGF7	316 aa		5.19	□□□□□ -1.58
SEC13-219	ENST00000492602	CBLC	Q9ULV8	474 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms