RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 OR5K3A6NET4 321 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 SGTAO43765 313 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 SLC35G4P0C7Q5 338 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 ITGALP20701 1170 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 PDE1BQ01064 536 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 GSE1Q14687 1217 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
SGMS1-204ENST00000492601 ATG14Q6ZNE5 492 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 PPP1R3BQ86XI6 285 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 CFAP206Q8IYR0 622 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 NXPE1Q8N323 547 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 FAM71DQ8N9W8 422 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 SIDT2Q8NBJ9 832 aaKnown RBP16.85■□□□□ 0.29
SGMS1-204ENST00000492601 UBXN4Q92575 508 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 ULK4Q96C45 1275 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 DNAJC1Q96KC8 554 aaKnown RBP16.85■□□□□ 0.29
SGMS1-204ENST00000492601 RMDN2Q96LZ7 410 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 BAG1Q99933 345 aaPredicted RBP16.85■□□□□ 0.29
SGMS1-204ENST00000492601 DESI2Q9BSY9 194 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 HRASLS2Q9NWW9 162 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 CCDC88CQ9P219 2028 aa16.85■□□□□ 0.29
SGMS1-204ENST00000492601 HECTD1Q9ULT8 2610 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 UBR5O95071 2799 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 TNRC6AQ8NDV7 1962 aaKnown RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 UBA6A0AVT1 1052 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 GOLGA6L9A6NEM1 432 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 AGAP14A8MT82 685 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 SUV39H1O43463 412 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 LDB2O43679 373 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 KATNA1O75449 491 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 WISP1O95388 367 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 TIAF1O95411 115 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 FTCDO95954 541 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 EBLN1P0CF75 366 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 RALBP11234 206 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 FOLR1P15328 257 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 TPH1P17752 444 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 MC4RP32245 332 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 HADHAP40939 763 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 ARCN1P48444 511 aaKnown RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 ARL4DP49703 201 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 CDKN1CP49918 316 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 MC1RQ01726 317 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 KCNC4Q03721 635 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 TUBB3Q13509 450 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 SNX20Q7Z614 316 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 TAB3Q8N5C8 712 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 UBL4BQ8N7F7 174 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 LRRC45Q96CN5 670 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 SLC41A2Q96JW4 573 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 PPP1R2P1Q96PQ5 205 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 COPS8Q99627 209 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 CLMPQ9H6B4 373 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 ARNT2Q9HBZ2 717 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 PDE7BQ9NP56 450 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 PIH1D1Q9NWS0 290 aaKnown RBP16.84■□□□□ 0.29
SGMS1-204ENST00000492601 SEMA5BQ9P283 1151 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 SLC24A2Q9UI40 661 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 RARRES3Q9UL19 164 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 FLNCQ14315 2725 aa16.84■□□□□ 0.29
SGMS1-204ENST00000492601 OR6C74A6NCV1 312 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 TLCD2A6NGC4 264 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 TERTO14746 1132 aaKnown RBP16.83■□□□□ 0.28
SGMS1-204ENST00000492601 METTL18O95568 372 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 CCNYL3P0C7X3 344 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 PRSS56P0CW18 603 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 PRLHRP49683 370 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 SEPT6Q14141 434 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 ERV3-1Q14264 604 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 KRT33BQ14525 404 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 ZRANB3Q5FWF4 1079 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 PWWP2BQ6NUJ5 590 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 OOSP2Q86WS3 158 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 TMEM139Q8IV31 216 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 LINC00615Q96LM1 132 aaPredicted RBP16.83■□□□□ 0.28
SGMS1-204ENST00000492601 KIR3DX1Q9H7L2 352 aa16.83■□□□□ 0.28
SGMS1-204ENST00000492601 ZNF71Q9NQZ8 489 aaPredicted RBP16.83■□□□□ 0.28
SGMS1-204ENST00000492601 FEZ2Q9UHY8 353 aaPredicted RBP16.83■□□□□ 0.28
SGMS1-204ENST00000492601 R3HDM2Q9Y2K5 976 aaKnown RBP16.83■□□□□ 0.28
SGMS1-204ENST00000492601 PTPN13Q12923 2485 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 TCRBV7S2A1N4TA0A589 114 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 KLHL33A6NCF5 533 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 GOLGA6L3A6NEY3 463 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 CFAP99D6REC4 459 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 DDX3YO15523 660 aaKnown RBP16.82■□□□□ 0.28
SGMS1-204ENST00000492601 NTRK1P04629 796 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 ATP1B2P14415 290 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-204ENST00000492601 GDF10P55107 478 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 KIF5AQ12840 1032 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 POU6F1Q14863 301 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 PARP6Q2NL67 630 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 KCTD11Q693B1 232 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 CAPRIN2Q6IMN6 1127 aaKnown RBP16.82■□□□□ 0.28
SGMS1-204ENST00000492601 ARMC6Q6NXE6 501 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 CYB5D1Q6P9G0 228 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 FBXO38Q6PIJ6 1188 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 TAS2R42Q7RTR8 314 aa16.82■□□□□ 0.28
SGMS1-204ENST00000492601 KLHDC8BQ8IXV7 354 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms