RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 AGTP01019 485 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 ZFXP17010 805 aaPredicted RBP12.94□□□□□ -0.34
HDAC3-213ENST00000492506 GNAZP19086 355 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 RASSF2P50749 326 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 PTSQ03393 145 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 KPNB1Q14974 876 aaKnown RBP12.94□□□□□ -0.34
HDAC3-213ENST00000492506 SPRED3Q2MJR0 410 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 C6orf15Q6UXA7 325 aaPredicted RBP12.94□□□□□ -0.34
HDAC3-213ENST00000492506 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 LZTR1Q8N653 840 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 GALNT6Q8NCL4 622 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 CPT1CQ8TCG5 803 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 PIH1D2Q8WWB5 315 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 IFT81Q8WYA0 676 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 MGME1Q9BQP7 344 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 SNRNP25Q9BV90 132 aaKnown RBP12.94□□□□□ -0.34
HDAC3-213ENST00000492506 TMEM109Q9BVC6 243 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 TBC1D10AQ9BXI6 508 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 ULBP3Q9BZM4 244 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 FAM207AQ9NSI2 230 aaPredicted RBP12.94□□□□□ -0.34
HDAC3-213ENST00000492506 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 STOML1Q9UBI4 398 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 CNOT6Q9ULM6 557 aaKnown RBP12.94□□□□□ -0.34
HDAC3-213ENST00000492506 PRKAB1Q9Y478 270 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 COMMD3-BMI1R4GMX3 469 aa12.94□□□□□ -0.34
HDAC3-213ENST00000492506 MACROD2A1Z1Q3 448 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 BTNL10A8MVZ5 291 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 FZD6O60353 706 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 DNAJB5O75953 348 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 RECKO95980 971 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 C9P02748 559 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 PDHA1P08559 390 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 NUDT17P0C025 328 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 IDO1P14902 403 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 CTPS1P17812 591 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 ATP5DP30049 168 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 MMP13P45452 471 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 MAPK9P45984 424 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 PPM1FP49593 454 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-213ENST00000492506 GFERP55789 205 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 SLC7A5Q01650 507 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 DPYSQ14117 519 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 KRT71Q3SY84 523 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 LRRC66Q68CR7 880 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 ZNF765Q7L2R6 523 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 INPP5DQ92835 1189 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 SH3KBP1Q96B97 665 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 C9orf72Q96LT7 481 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 TRIM55Q9BYV6 548 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 LACRTQ9GZZ8 138 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 EPB41L1Q9H4G0 881 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
HDAC3-213ENST00000492506 NDUFA13Q9P0J0 144 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 NOVA2Q9UNW9 492 aaKnown RBP12.93□□□□□ -0.34
HDAC3-213ENST00000492506 ARL2BPQ9Y2Y0 163 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 MAP4K5Q9Y4K4 846 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 PCDHGA6Q9Y5G7 932 aa12.93□□□□□ -0.34
HDAC3-213ENST00000492506 OAS3Q9Y6K5 1087 aaKnown RBP12.93□□□□□ -0.34
HDAC3-213ENST00000492506 CDC14CA4D256 554 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 ANKRD62A6NC57 917 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 INPP4BO15327 924 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 MAFKO60675 156 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 CREG1O75629 220 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 SORBS2O94875 1100 aaKnown RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 RARAP10276 462 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 F3P13726 295 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 NFKBIAP25963 317 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 HCAR3P49019 387 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 MAXP61244 160 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 UBE2IP63279 158 aaKnown RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 SH3BP2P78314 561 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 FOXM1Q08050 763 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 SEMA5AQ13591 1074 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 ZNF235Q14590 738 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 IHHQ14623 411 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 TMEM154Q6P9G4 183 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 DCUN1D2Q6PH85 259 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 USP45Q70EL2 814 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 ASRGL1Q7L266 308 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 CHST15Q7LFX5 561 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 MYLK4Q86YV6 388 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 DNAJC9Q8WXX5 260 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 SYN2Q92777 582 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 GBP5Q96PP8 586 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 NR1H4Q96RI1 486 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 SMC6Q96SB8 1091 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 NAP1L3Q99457 506 aaPredicted RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 RIOK2Q9BVS4 552 aaKnown RBP12.92□□□□□ -0.34
HDAC3-213ENST00000492506 MLXIPLQ9NP71 852 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 CPNE7Q9UBL6 633 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 KCNK6Q9Y257 313 aa12.92□□□□□ -0.34
HDAC3-213ENST00000492506 SIK3Q9Y2K2 1263 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms