RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 NDUFAF5Q5TEU4 345 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 GSG1LQ6UXU4 331 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 FOXL2NBQ6ZUU3 175 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 DSG4Q86SJ6 1040 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 TMEM173Q86WV6 379 aaPredicted RBP3.73□□□□□ -1.81
VTA1-204ENST00000491881 CEP57Q86XR8 500 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 RFLNBQ8N5W9 214 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 KCTD6Q8NC69 237 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 OR13A1Q8NGR1 328 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 SMPDL3BQ92485 455 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 NR4A3Q92570 626 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 ERP27Q96DN0 273 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 LMLNQ96KR4 655 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 PRMT6Q96LA8 375 aaPredicted RBP3.73□□□□□ -1.81
VTA1-204ENST00000491881 ZNF582Q96NG8 517 aaPredicted RBP3.73□□□□□ -1.81
VTA1-204ENST00000491881 DGAT2Q96PD7 388 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 NEK1Q96PY6 1258 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 SLC22A12Q96S37 553 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 TXLNGYQ9BZA5 131 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 RAB6CQ9H0N0 254 aa3.73□□□□□ -1.81
VTA1-204ENST00000491881 PPIL3Q9H2H8 161 aaKnown RBP3.73□□□□□ -1.81
VTA1-204ENST00000491881 FAF1Q9UNN5 650 aaPredicted RBP3.73□□□□□ -1.81
VTA1-204ENST00000491881 WBP11Q9Y2W2 641 aaKnown RBP3.73□□□□□ -1.81
VTA1-204ENST00000491881 A0A1B0GUV1 79 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 PRSS51A0A1B0GVH4 220 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 TO15178 435 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 SYNGR3O43761 229 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 GPR137BO60478 399 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 PLOD3O60568 738 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 TSPAN1O60635 241 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 CREG1O75629 220 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 WISP2O76076 250 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 TFAP2AP05549 437 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 ADRB2P07550 413 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 DNASE1P24855 282 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 MMP15P51511 669 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 GAGE5Q13069 117 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 GAGE6Q13070 117 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 SNTB1Q13884 538 aaKnown RBP3.72□□□□□ -1.81
VTA1-204ENST00000491881 NR1D2Q14995 579 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 ZNF672Q499Z4 452 aaPredicted RBP3.72□□□□□ -1.81
VTA1-204ENST00000491881 C9orf152Q5JTZ5 239 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 FAM109BQ6ICB4 259 aaPredicted RBP3.72□□□□□ -1.81
VTA1-204ENST00000491881 KLC3Q6P597 504 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 C9orf139Q6ZV77 190 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 PIWIL4Q7Z3Z4 852 aaKnown RBP3.72□□□□□ -1.81
VTA1-204ENST00000491881 PTOV1Q86YD1 416 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 NME8Q8N427 588 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 KBTBD3Q8NAB2 608 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 RBM15BQ8NDT2 890 aaKnown RBP3.72□□□□□ -1.81
VTA1-204ENST00000491881 DMBX1Q8NFW5 382 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 TSPAN14Q8NG11 270 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 OR6C1Q96RD1 312 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 FNDC11Q9BVV2 318 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 DONSONQ9NYP3 566 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 STK26Q9P289 416 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 ZNF711Q9Y462 761 aa3.72□□□□□ -1.81
VTA1-204ENST00000491881 A0A0G2JNG1 304 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 ELOVL7A1L3X0 281 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 IFITM10A6NMD0 228 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 LDLRP01130 860 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 CENPBP07199 599 aaPredicted RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 H1F0P07305 194 aaKnown RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 F7P08709 466 aaPredicted RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 GABRA5P31644 462 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 CDH13P55290 713 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 CDK3Q00526 305 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 AIMP1Q12904 312 aaKnown RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 IL11RAQ14626 422 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 KIR2DS5Q14953 304 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 DUOXA1Q1HG43 343 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 ZNF718Q3SXZ3 478 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 ACCSLQ4AC99 568 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 CBWD6Q4V339 395 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 CBWD3Q5JTY5 395 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 C9orf50Q5SZB4 431 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 GFI1BQ5VTD9 330 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 TEX38Q6PEX7 206 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 FIGLAQ6QHK4 219 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 PLXDC2Q6UX71 529 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 GDPD4Q6W3E5 623 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 ZNF852Q6ZMS4 543 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 FOXP4Q8IVH2 680 aaPredicted RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 PAPD5Q8NDF8 572 aaKnown RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 ZFAND2BQ8WV99 257 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 DAZLQ92904 295 aaKnown RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 SPACA9Q96E40 222 aaPredicted RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 MS4A10Q96PG2 267 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 PKP4Q99569 1192 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 EPYCQ99645 322 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 SLA2Q9H6Q3 261 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 ZNF556Q9HAH1 456 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 UPF2Q9HAU5 1272 aaKnown RBP3.71□□□□□ -1.82
VTA1-204ENST00000491881 SLC38A7Q9NVC3 462 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 GDE1Q9NZC3 331 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 TAAR2Q9P1P5 351 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 RHCGQ9UBD6 479 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 ANAPC2Q9UJX6 822 aa3.71□□□□□ -1.82
VTA1-204ENST00000491881 GRIP1Q9Y3R0 1128 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms