RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ERVK-8P63133 956 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 PHC1P78364 1004 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 SOX4Q06945 474 aaPredicted RBP19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 ZNF549Q6P9A3 640 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 VASH1Q7L8A9 365 aaPredicted RBP19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 TAC4Q86UU9 113 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 OR2T11Q8NH01 316 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 FIG4Q92562 907 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 ZNF599Q96NL3 588 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 SMOQ99835 787 aa19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 MRPL42Q9Y6G3 142 aaKnown RBP19.08■□□□□ 0.64
SNAPC3-206ENST00000490969 SUPT3HB4E1H0 165 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 ANGPTL1O95841 491 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 ALDH1A1P00352 501 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 CD6P30203 668 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 DMPKQ09013 629 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 PPP1R8Q12972 351 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 PRKG2Q13237 762 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 FRS2Q8WU20 508 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 TRIT1Q9H3H1 467 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 PCDHGA10Q9Y5H3 936 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 ILVBLA1L0T0 632 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 GRXCR2A6NFK2 248 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 MEIS3P2A8K0S8 358 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 ASGR1P07306 291 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 PRDX3P30048 256 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 NEK2P51955 445 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 LILRA4P59901 499 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 IL5RAQ01344 420 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 YWHAHQ04917 246 aaPredicted RBP19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 DGCR6Q14129 220 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 KCNA10Q16322 511 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 UBXN11Q5T124 520 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 PRR23BQ6ZRT6 265 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 FKBP9P1Q75LS8 142 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 PRSS48Q7RTY5 328 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 NECAB2Q7Z6G3 386 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 FBXO39Q8N4B4 442 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 TOP6BLQ8N6T0 577 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 ARRDC4Q8NCT1 418 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 FBLIM1Q8WUP2 373 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 NUSAP1Q9BXS6 441 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 TFB2MQ9H5Q4 396 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 UTS2RQ9UKP6 389 aa19.07■□□□□ 0.64
SNAPC3-206ENST00000490969 M0QX08 132 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 KCNK2O95069 426 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 PRKACGP22612 351 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 IGFBP6P24592 240 aaPredicted RBP19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 HABP4Q5JVS0 413 aaKnown RBP19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 WSCD1Q658N2 575 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ANKS6Q68DC2 871 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 BHLHA9Q7RTU4 235 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 SVOPQ8N4V2 548 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ZMIZ2Q8NF64 920 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 SLC47A1Q96FL8 570 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 CLSTN3Q9BQT9 956 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 PRMT5O14744 637 aaPredicted RBP19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 BCKDKO14874 412 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 SLC16A6O15403 523 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 TPD52L2O43399 206 aaKnown RBP19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 DYRK3O43781 588 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 DLGAP3O95886 979 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 CHEK2O96017 543 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 PSMB9P28065 219 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 IL18R1Q13478 541 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 NPTX1Q15818 432 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ATP6AP1LQ52LC2 224 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 RAB41Q5JT25 222 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 SYT6Q5T7P8 510 aaPredicted RBP19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 CCDC81Q6ZN84 652 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 SYVN1Q86TM6 617 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 AADATQ8N5Z0 425 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 REXO5Q96IC2 774 aaKnown RBP19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ZNF583Q96ND8 569 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 CCDC115Q96NT0 180 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 YME1L1Q96TA2 773 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ACOX2Q99424 681 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 KATNAL1Q9BW62 490 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 GORASP2Q9H8Y8 452 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ACTR8Q9H981 624 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 ATP13A1Q9HD20 1204 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 CRTAC1Q9NQ79 661 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 CREBZFQ9NS37 354 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 NDFIP2Q9NV92 336 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 TMEM30AQ9NV96 361 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 LIMD1Q9UGP4 676 aa19.06■□□□□ 0.64
SNAPC3-206ENST00000490969 KRT75O95678 551 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 S100BP04271 92 aaPredicted RBP19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 CAMK2BQ13554 666 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 RAPSNQ13702 412 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 CLCA4Q14CN2 919 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 TIGD7Q6NT04 549 aaPredicted RBP19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 NOTUMQ6P988 496 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 EFL1Q7Z2Z2 1120 aaKnown RBP19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 TMEM179BQ7Z7N9 219 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 POC5Q8NA72 575 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 FNDC5Q8NAU1 212 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 OSGIN1Q9UJX0 560 aa19.05■□□□□ 0.64
SNAPC3-206ENST00000490969 FBXO10Q9UK96 956 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms