RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PADI4Q9UM07 663 aa15.52■□□□□ 0.08
TRA2A-208ENST00000490942 DNAJC16Q9Y2G8 782 aa15.52■□□□□ 0.08
TRA2A-208ENST00000490942 U3KQA8 63 aa15.52■□□□□ 0.08
TRA2A-208ENST00000490942 FRYLO94915 3013 aa15.52■□□□□ 0.07
TRA2A-208ENST00000490942 WDR87Q6ZQQ6 2873 aa15.52■□□□□ 0.07
TRA2A-208ENST00000490942 PCNX2A6NKB5 2137 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 PDZK1P1A8MUH7 402 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 B4DGG1 531 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 DKK1O94907 266 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 SLCO2B1O94956 709 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 SLC35G4P0C7Q5 338 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 AOAHP28039 575 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 NDUFS1P28331 727 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 FMO4P31512 558 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 GPR3P46089 330 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 CSE1LP55060 971 aaKnown RBP15.51■□□□□ 0.07
TRA2A-208ENST00000490942 MPP1Q00013 466 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 CLPPQ16740 277 aaPredicted RBP15.51■□□□□ 0.07
TRA2A-208ENST00000490942 TTLL9Q3SXZ7 439 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 ZNF789Q5FWF6 425 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 CAPRIN2Q6IMN6 1127 aaKnown RBP15.51■□□□□ 0.07
TRA2A-208ENST00000490942 UGT3A1Q6NUS8 523 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 FAM83HQ6ZRV2 1179 aaPredicted RBP15.51■□□□□ 0.07
TRA2A-208ENST00000490942 OTOAQ7RTW8 1153 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 SLC22A15Q8IZD6 547 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 ARL14Q8N4G2 192 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 KYQ8NBH2 561 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 DEFB124Q8NES8 71 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 WDR48Q8TAF3 677 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 AARSD1Q9BTE6 412 aaKnown RBP15.51■□□□□ 0.07
TRA2A-208ENST00000490942 OR52A5Q9H2C5 316 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 RHOJQ9H4E5 214 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 PRDM8Q9NQV8 689 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 TXNDC16Q9P2K2 825 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 HEBP2Q9Y5Z4 205 aa15.51■□□□□ 0.07
TRA2A-208ENST00000490942 E5RI56 91 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 IFRD1O00458 451 aaPredicted RBP15.5■□□□□ 0.07
TRA2A-208ENST00000490942 SNX2O60749 519 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 VPS26AO75436 327 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 KCNK5O95279 499 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 TRIM16O95361 564 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 BRAFP15056 766 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 CCR7P32248 378 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 GP5P40197 560 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 MAPK9P45984 424 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 ACADVLP49748 655 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 UBE2IP63279 158 aaKnown RBP15.5■□□□□ 0.07
TRA2A-208ENST00000490942 E2F1Q01094 437 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 GBX1Q14549 363 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 SYTL3Q4VX76 610 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.5■□□□□ 0.07
TRA2A-208ENST00000490942 LRRC8EQ6NSJ5 796 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 ZNF549Q6P9A3 640 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 CNSTQ6PJW8 725 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 STRA8Q7Z7C7 330 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 ZC3HC1Q86WB0 502 aaKnown RBP15.5■□□□□ 0.07
TRA2A-208ENST00000490942 SLC37A2Q8TED4 501 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 FBF1Q8TES7 1133 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 CAMK1GQ96NX5 476 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.5■□□□□ 0.07
TRA2A-208ENST00000490942 TAS2R13Q9NYV9 303 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 CPNE7Q9UBL6 633 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 MED16Q9Y2X0 877 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 PIKFYVEQ9Y2I7 2098 aa15.5■□□□□ 0.07
TRA2A-208ENST00000490942 GOLGA4Q13439 2230 aaKnown RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 ZFC3H1O60293 1989 aaKnown RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 CNOT1A5YKK6 2376 aaKnown RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 ARHGEF17Q96PE2 2063 aaPredicted RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 A0A087WUV0 522 aaPredicted RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 NIPSNAP2O75323 286 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 EML2O95834 649 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 CBSLP0DN79 551 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 ENO3P13929 434 aaPredicted RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 CHRM3P20309 590 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 PBLDP30039 288 aaPredicted RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 CBSP35520 551 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 NOVA1P51513 510 aaKnown RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 CLCN7P51798 805 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 PMS2P54278 862 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 BOP1Q14137 746 aaKnown RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 TCEA2Q15560 299 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 SMAD1Q15797 465 aaKnown RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 ERCC6LQ2NKX8 1250 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 KLHL38Q2WGJ6 581 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 KBTBD12Q3ZCT8 623 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 GRTP1Q5TC63 336 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 FAM45BPQ6NSW5 357 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 EMBQ6PCB8 327 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 CAPN12Q6ZSI9 719 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 NEK10Q6ZWH5 1172 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 PDZD3Q86UT5 571 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 ZBTB2Q8N680 514 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 FAM45AQ8TCE6 357 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 NAT14Q8WUY8 206 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 EPB41L1Q9H4G0 881 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 SMYD2Q9NRG4 433 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 SIRPGQ9P1W8 387 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 ZNF624Q9P2J8 865 aaPredicted RBP15.49■□□□□ 0.07
TRA2A-208ENST00000490942 FETUBQ9UGM5 382 aa15.49■□□□□ 0.07
TRA2A-208ENST00000490942 RABGEF1Q9UJ41 708 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms