RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	TIMMDC1	Q9NPL8	285 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	POLR3B	Q9NW08	1133 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZDHHC3	Q9NYG2	299 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MARCH4	Q9P2E8	410 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	RIMS3	Q9UJD0	308 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	BLOC1S6	Q9UL45	172 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FAM50B	Q9Y247	325 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	HS3ST2	Q9Y278	367 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PCDHB9	Q9Y5E1	797 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	OR51B4	Q9Y5P0	310 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	INSL5	Q9Y5Q6	135 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GPR45	Q9Y5Y3	372 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	IRAK3	Q9Y616	596 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TTC3	P53804	2025 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SHROOM3	Q8TF72	1996 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	C1orf232	A0A0U1RR37	186 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833		E7ENX8	843 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	GFRA2	O00451	464 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	E2F3	O00716	465 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PER2	O15055	1255 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	AKAP10	O43572	662 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	XYLB	O75191	536 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	STK16	O75716	305 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	RECQL5	O94762	991 aa	Predicted RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	MYO1D	O94832	1006 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SCEL	O95171	688 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	H6PD	O95479	791 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	CLDN9	O95484	217 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PRAMEF1	O95521	474 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	HPR	P00739	348 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	LDLR	P01130	860 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ASL	P04424	464 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SRPRA	P08240	638 aa	Known RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	HNRNPA1	P09651	372 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	CTSA	P10619	480 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	HSD3B1	P14060	373 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PRPH2	P23942	346 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	HSD3B2	P26439	372 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	HOXA9	P31269	272 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	RPL3	P39023	403 aa	Known RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PGF	P49763	221 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	DCDC1	P59894	354 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ARF5	P84085	180 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SRSF11	Q05519	484 aa	Known RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TOP3A	Q13472	1001 aa	Predicted RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PWP1	Q13610	501 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	GTF2H2	Q13888	395 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ARHGEF7	Q14155	803 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	GK3P	Q14409	553 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	OR4D1	Q15615	310 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TSN	Q15631	228 aa	Known RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	FXN	Q16595	210 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	MYLK3	Q32MK0	819 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PLA2G4E	Q3MJ16	856 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	KCTD21	Q4G0X4	260 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	C4orf48	Q5BLP8	95 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF789	Q5FWF6	425 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TBCEL	Q5QJ74	424 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	C6orf136	Q5SQH8	315 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PRPF38B	Q5VTL8	546 aa	Known RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	LIPJ	Q5W064	366 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TTC23	Q5W5X9	447 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TMEM198	Q66K66	360 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	GTF2H2C	Q6P1K8	395 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PAOX	Q6QHF9	649 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TMEM207	Q6UWW9	146 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	LPCAT2	Q7L5N7	544 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ZFAND4	Q86XD8	727 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	NRSN1	Q8IZ57	195 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	EID3	Q8N140	333 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	NXPE1	Q8N323	547 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SVOPL	Q8N434	492 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SPATA6L	Q8N4H0	392 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	MEIOB	Q8N635	442 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ZBTB2	Q8N680	514 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	HIPK4	Q8NE63	616 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	GPR152	Q8TDT2	470 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	WFIKKN2	Q8TEU8	576 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	EEF1AKMT1	Q8WVE0	214 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	PIH1D2	Q8WWB5	315 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ASZ1	Q8WWH4	475 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	NCSTN	Q92542	709 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF514	Q96K75	400 aa	Predicted RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	CCDC115	Q96NT0	180 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	EGFL8	Q99944	293 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TUBA1C	Q9BQE3	449 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ZSCAN5A	Q9BUG6	496 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SPATA16	Q9BXB7	569 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ANKRD60	Q9BZ19	345 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SHCBP1L	Q9BZQ2	653 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	CD244	Q9BZW8	370 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	TRIM4	Q9C037	500 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.24	□□□□□ -1.41
FN1-223	ENST00000490833	CIPC	Q9C0C6	399 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	ALG2	Q9H553	416 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SLC32A1	Q9H598	525 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	SUV39H2	Q9H5I1	410 aa		6.24	□□□□□ -1.41
FN1-223	ENST00000490833	MAGIX	Q9H6Y5	334 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms