RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	CHMP2B	Q9UQN3	213 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	AK5	Q9Y6K8	562 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	HEATR5B	Q9P2D3	2071 aa		18.17	■□□□□ 0.5
C4A-256	ENST00000490663	URB1	O60287	2271 aa	Known RBP	18.17	■□□□□ 0.5
C4A-256	ENST00000490663	AP2A2	O94973	939 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	CPNE6	O95741	557 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	MTHFD1	P11586	935 aa	Known RBP	18.16	■□□□□ 0.5
C4A-256	ENST00000490663	GPR3	P46089	330 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	MORF4L2	Q15014	288 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	LYPLAL1	Q5VWZ2	237 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	WASH2P	Q6VEQ5	465 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	TMEM26	Q6ZUK4	368 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	PCGF5	Q86SE9	256 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	ANKMY2	Q8IV38	441 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	SLITRK4	Q8IW52	837 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	DENND6A	Q8IWF6	608 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	WDR48	Q8TAF3	677 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	NCSTN	Q92542	709 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	RSC1A1	Q92681	617 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	CCDC74B	Q96LY2	380 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	WASH6P	Q9NQA3	447 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	SLC17A6	Q9P2U8	582 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	CCDC88C	Q9P219	2028 aa		18.16	■□□□□ 0.5
C4A-256	ENST00000490663	MDC1	Q14676	2089 aa	Known RBP	18.16	■□□□□ 0.5
C4A-256	ENST00000490663		A8MU76	341 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	BRINP1	O60477	761 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	KCNJ13	O60928	360 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	NDUFS3	O75489	264 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	FTH1	P02794	183 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	OR56A5	P0C7T3	313 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	ELK3	P41970	407 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	TTPA	P49638	278 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	GFER	P55789	205 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	PPP1CA	P62136	330 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	CTBP1	Q13363	440 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	C16orf72	Q14CZ0	275 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	FASTKD3	Q14CZ7	662 aa	Known RBP	18.15	■□□□□ 0.5
C4A-256	ENST00000490663	TRADD	Q15628	312 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	SYTL3	Q4VX76	610 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	AARS2	Q5JTZ9	985 aa	Known RBP	18.15	■□□□□ 0.5
C4A-256	ENST00000490663	CTSL3P	Q5NE16	218 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	ZNF470	Q6ECI4	717 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	CERS6	Q6ZMG9	384 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	CENPU	Q71F23	418 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	PIM3	Q86V86	326 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	PHC3	Q8NDX5	983 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	OR10G6	Q8NH81	332 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	NXPE2	Q96DL1	559 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	SGSM3	Q96HU1	749 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	TTC1	Q99614	292 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	OR52A5	Q9H2C5	316 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	VPS37B	Q9H9H4	285 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	SLC40A1	Q9NP59	571 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	FBXO6	Q9NRD1	293 aa	Predicted RBP	18.15	■□□□□ 0.5
C4A-256	ENST00000490663	C20orf96	Q9NUD7	363 aa	Predicted RBP	18.15	■□□□□ 0.5
C4A-256	ENST00000490663	POT1	Q9NUX5	634 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	CRYL1	Q9Y2S2	319 aa		18.15	■□□□□ 0.5
C4A-256	ENST00000490663	IGHV5-10-1	A0A0J9YXX1	117 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	LILRA5	A6NI73	299 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	PRMT5	O14744	637 aa	Predicted RBP	18.14	■□□□□ 0.49
C4A-256	ENST00000490663	DUX1	O43812	170 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	NIPSNAP2	O75323	286 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	USP1	O94782	785 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	PROS1	P07225	676 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	PAM	P19021	973 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	ITIH1	P19827	911 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	FMO4	P31512	558 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	CCR7	P32248	378 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	ABCG1	P45844	678 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	MPP1	Q00013	466 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	SLC7A5	Q01650	507 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	CKAP4	Q07065	602 aa	Known RBP	18.14	■□□□□ 0.49
C4A-256	ENST00000490663	CRYM	Q14894	314 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	TYSND1	Q2T9J0	566 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	PTRHD1	Q6GMV3	140 aa	Known RBP	18.14	■□□□□ 0.49
C4A-256	ENST00000490663	NEPRO	Q6NW34	567 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.14	■□□□□ 0.49
C4A-256	ENST00000490663	TMEM135	Q86UB9	458 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	VRK3	Q8IV63	474 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	CACTIN-AS1	Q8N1I8	211 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	LPGAT1	Q92604	370 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	P2RY12	Q9H244	342 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	CCDC86	Q9H6F5	360 aa	Known RBP	18.14	■□□□□ 0.49
C4A-256	ENST00000490663	PLAC1	Q9HBJ0	212 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	ACSL5	Q9ULC5	683 aa		18.14	■□□□□ 0.49
C4A-256	ENST00000490663	CCDC187	A0A096LP49	1063 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	C17orf113	A0A1B0GUU1	675 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	FAM187A	A6NFU0	413 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	CAPNS1	P04632	268 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	ERVK-10	P10266	1014 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	PGAM1	P18669	254 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	ETV5	P41161	510 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	SLC1A2	P43004	574 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	THOC5	Q13769	683 aa	Known RBP	18.13	■□□□□ 0.49
C4A-256	ENST00000490663	PLCL1	Q15111	1095 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	HIF1A	Q16665	826 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	LONRF1	Q17RB8	773 aa		18.13	■□□□□ 0.49
C4A-256	ENST00000490663	DNAJC21	Q5F1R6	531 aa	Known RBP	18.13	■□□□□ 0.49
C4A-256	ENST00000490663	CAPRIN2	Q6IMN6	1127 aa	Known RBP	18.13	■□□□□ 0.49
C4A-256	ENST00000490663	MRNIP	Q6NTE8	343 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms