RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SIDT1Q9NXL6 827 aaKnown RBP19.31■□□□□ 0.68
SMC4-222ENST00000490207 SMG1Q96Q15 3661 aaKnown RBP19.3■□□□□ 0.68
SMC4-222ENST00000490207 OR51F1A6NGY5 319 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 POLBP06746 335 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 APRTP07741 180 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 CXCR5P32302 372 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 FOXN2P32314 431 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 RPL22P35268 128 aaKnown RBP19.3■□□□□ 0.68
SMC4-222ENST00000490207 SEPHS1P49903 392 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 CACHD1Q5VU97 1274 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 KIAA1614Q5VZ46 1190 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 KLHL35Q6PF15 583 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 FAM92BQ6ZTR7 304 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 GSTA5Q7RTV2 222 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 SPDYE1Q8NFV5 336 aaPredicted RBP19.3■□□□□ 0.68
SMC4-222ENST00000490207 OR13J1Q8NGT2 312 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 SLC39A7Q92504 469 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMC4-222ENST00000490207 ZDHHC12Q96GR4 267 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 ZPBPQ9BS86 351 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 CCM2Q9BSQ5 444 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 RAB33BQ9H082 229 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 APMAPQ9HDC9 416 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 EPHA6Q9UF33 1036 aa19.3■□□□□ 0.68
SMC4-222ENST00000490207 DRG1Q9Y295 367 aaKnown RBP19.3■□□□□ 0.68
SMC4-222ENST00000490207 C17orf113A0A1B0GUU1 675 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 CCDC162PA2VCL2 907 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 EFSO43281 561 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 RAD1O60671 282 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 PPP1CAP62136 330 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 BASP1P80723 227 aaKnown RBP19.29■□□□□ 0.68
SMC4-222ENST00000490207 ITIH4Q14624 930 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 GSE1Q14687 1217 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 TAF1BQ53T94 588 aaPredicted RBP19.29■□□□□ 0.68
SMC4-222ENST00000490207 TSTD2Q5T7W7 516 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 AFTPHQ6ULP2 937 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 LSM14AQ8ND56 463 aaKnown RBP19.29■□□□□ 0.68
SMC4-222ENST00000490207 NKD1Q969G9 470 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 EIF2B3Q9NR50 452 aaKnown RBP19.29■□□□□ 0.68
SMC4-222ENST00000490207 SMARCAL1Q9NZC9 954 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 RIMKLBQ9ULI2 386 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 TCAF1Q9Y4C2 921 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 HEBP2Q9Y5Z4 205 aa19.29■□□□□ 0.68
SMC4-222ENST00000490207 TK2O00142 265 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 POLR1CO15160 346 aaPredicted RBP19.28■□□□□ 0.68
SMC4-222ENST00000490207 KIF1CO43896 1103 aaKnown RBP19.28■□□□□ 0.68
SMC4-222ENST00000490207 AP2A2O94973 939 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 ADRA1DP25100 572 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 NDUFS1P28331 727 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 NSG1P42857 185 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 FOXM1Q08050 763 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 CAPRIN2Q6IMN6 1127 aaKnown RBP19.28■□□□□ 0.68
SMC4-222ENST00000490207 PCSK4Q6UW60 755 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 C4orf22Q6V702 233 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 PACS1Q6VY07 963 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 CACNA2D3Q8IZS8 1091 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 CLDN19Q8N6F1 224 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 IL22RA1Q8N6P7 574 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 PPHLN1Q8NEY8 458 aaKnown RBP19.28■□□□□ 0.68
SMC4-222ENST00000490207 TTC9Q92623 222 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 KIR3DX1Q9H7L2 352 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 SLC2A6Q9UGQ3 507 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 SLC24A2Q9UI40 661 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 PCDHGA4Q9Y5G9 962 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 COLEC10Q9Y6Z7 277 aa19.28■□□□□ 0.68
SMC4-222ENST00000490207 OR5K3A6NET4 321 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 QSOX1O00391 747 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 GOT2P00505 430 aaKnown RBP19.27■□□□□ 0.68
SMC4-222ENST00000490207 GSTM1P09488 218 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 KCNJ1P48048 391 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 GSTM4Q03013 218 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 KRT33BQ14525 404 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 ZNF658BQ4V348 819 aaPredicted RBP19.27■□□□□ 0.68
SMC4-222ENST00000490207 ZNF449Q6P9G9 518 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 NLRP9Q7RTR0 991 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 OOSP2Q86WS3 158 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 ZSCAN1Q8NBB4 408 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 ZFPM2Q8WW38 1151 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 HDAC10Q969S8 669 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 OR52A5Q9H2C5 316 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 HOMER3Q9NSC5 361 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 PRSS21Q9Y6M0 314 aa19.27■□□□□ 0.68
SMC4-222ENST00000490207 ATMQ13315 3056 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 GOLGA6L3A6NEY3 463 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 IFRD1O00458 451 aaPredicted RBP19.26■□□□□ 0.67
SMC4-222ENST00000490207 STK17BO94768 372 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 WT1P19544 449 aaPredicted RBP19.26■□□□□ 0.67
SMC4-222ENST00000490207 SH3BP2P78314 561 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 PRAMEP78395 509 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 ACVR1Q04771 509 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 RPA4Q13156 261 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
SMC4-222ENST00000490207 PRELID2Q8N945 189 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 KLHL6Q8WZ60 621 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 UBXN4Q92575 508 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 PEX13Q92968 403 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 ZNF778Q96MU6 729 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 OR6C1Q96RD1 312 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 CD180Q99467 661 aa19.26■□□□□ 0.67
SMC4-222ENST00000490207 PILRAQ9UKJ1 303 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms