RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 BICC1Q9H694 974 aaKnown RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 ZBTB20Q9HC78 741 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 SLC52A3Q9NQ40 469 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 NPAP1Q9NZP6 1156 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 RHCGQ9UBD6 479 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 ADD3Q9UEY8 706 aaKnown RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 AMACRQ9UHK6 382 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 RSF1Q96T23 1441 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 LRRC72A6NJI9 287 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 B4DLN1 442 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 GCH1P30793 250 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 MRPL12P52815 198 aaKnown RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 PNLIPRP2P54317 469 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 EIF5P55010 431 aaKnown RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 TMF1P82094 1093 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 MELKQ14680 651 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 GCNT6Q5T4J0 391 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 FAM53AQ6NSI3 398 aaPredicted RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 KLC3Q6P597 504 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 INTS8Q75QN2 995 aaKnown RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 KBTBD6Q86V97 674 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 APLFQ8IW19 511 aaPredicted RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 C17orf53Q8N3J3 647 aaPredicted RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 ZFAND2BQ8WV99 257 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 NSUN4Q96CB9 384 aaKnown RBP4.78□□□□□ -1.64
CCDC39-206ENST00000489868 SLC47A1Q96FL8 570 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 TIGD1Q96MW7 591 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 PAFAH2Q99487 392 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 VPS28Q9UK41 221 aa4.78□□□□□ -1.64
CCDC39-206ENST00000489868 BLOC1S5-TXNDC5H3BN57 136 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 ADAMDEC1O15204 470 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 LDLRP01130 860 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 IGHV4-38-2P0DP08 117 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 SNRPEP62304 92 aaKnown RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 MAPRE1Q15691 268 aaKnown RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 ADALQ6DHV7 355 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 ITPRIPL1Q6GPH6 555 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 C15orf39Q6ZRI6 1047 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 LINC00346Q8IVM7 164 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 WDR20Q8TBZ3 569 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 FAM81BQ96LP2 452 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 ABHD6Q9BV23 337 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 RTN4RQ9BZR6 473 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 LARSQ9P2J5 1176 aaKnown RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 GPR34Q9UPC5 381 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 PTRH2Q9Y3E5 179 aaKnown RBP4.77□□□□□ -1.65
CCDC39-206ENST00000489868 SMCHD1A6NHR9 2005 aa4.77□□□□□ -1.65
CCDC39-206ENST00000489868 SOS1Q07889 1333 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-206ENST00000489868 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 HEPACAM2A8MVW5 462 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 EDIL3O43854 480 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 PRSS56P0CW18 603 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 CSH1P0DML2 217 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 CSH2P0DML3 217 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 PORP16435 677 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-206ENST00000489868 GNAZP19086 355 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 TRIM21P19474 475 aaKnown RBP4.76□□□□□ -1.65
CCDC39-206ENST00000489868 EPHA2P29317 976 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 HOXC8P31273 242 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 PSMC4P43686 418 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ATP12AP54707 1039 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 GNB1P62873 340 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ZNF876PQ49A33 203 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ASPRV1Q53RT3 343 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 GRTP1Q5TC63 336 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ADAM5Q6NVV9 412 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ARHGAP11AQ6P4F7 1023 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 PLD3Q8IV08 490 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 C1orf131Q8NDD1 294 aaKnown RBP4.76□□□□□ -1.65
CCDC39-206ENST00000489868 LGALS12Q96DT0 336 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 DUX3Q96PT4 197 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 FSD1Q9BTV5 496 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 HHATLQ9HCP6 504 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 OSER1Q9NX31 292 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ADPRHL2Q9NX46 363 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 ZNF148Q9UQR1 794 aa4.76□□□□□ -1.65
CCDC39-206ENST00000489868 SPIN1Q9Y657 262 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-206ENST00000489868 NTN3O00634 580 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-206ENST00000489868 ENTPD3O75355 529 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 GFPT2O94808 682 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 ZWINTO95229 277 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 NRIP1P48552 1158 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 PCLAFQ15004 111 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 TMEM30BQ3MIR4 351 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 HAUS6Q7Z4H7 955 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 LDB1Q86U70 411 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-206ENST00000489868 GPALPP1Q8IXQ4 340 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 CNBD1Q8NA66 436 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 POC5Q8NA72 575 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 TAS1R2Q8TE23 839 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 ARHGEF38Q9NXL2 777 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 PCDHGB4Q9UN71 923 aa4.75□□□□□ -1.65
CCDC39-206ENST00000489868 ANKRD18BA2A2Z9 1011 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 OR6C76A6NM76 312 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms