RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 DET1Q7L5Y6 550 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 RFX6Q8HWS3 928 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 DSELQ8IZU8 1212 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 RBMXL3Q8N7X1 1067 aaKnown RBP16.54■□□□□ 0.24
TOP3B-217ENST00000489581 DDHD1Q8NEL9 900 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-217ENST00000489581 NAT14Q8WUY8 206 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 CPT1BQ92523 772 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 CLIP3Q96DZ5 547 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 TEKT5Q96M29 485 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 TRABDQ9H4I3 376 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 IL17CQ9P0M4 197 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 FAM153AQ9UHL3 310 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 TCFL5Q9UL49 500 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 GLYATL1P3A0A0U1RQE8 302 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 LOC285095A0A1B0GVY8 99 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 ZNF487B1APH4 448 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 F5H423 210 aaPredicted RBP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 DDAH2O95865 285 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 RAB40ALP0C0E4 278 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 ZFXP17010 805 aaPredicted RBP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 POLR2CP19387 275 aaPredicted RBP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 ITGA1P56199 1179 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 WNT3AP56704 352 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 UBASH3AP57075 661 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 ABRQ12979 859 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 RAPSNQ13702 412 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 SIRPB2Q5JXA9 342 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 ZNF787Q6DD87 383 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 KDELC1Q6UW63 502 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 GLT6D1Q7Z4J2 308 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 RHOT1Q8IXI2 618 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 DTX3LQ8TDB6 740 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 BLOC1S5Q8TDH9 187 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 RNF25Q96BH1 459 aaPredicted RBP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 LRFN5Q96NI6 719 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 NLNQ9BYT8 704 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 SLC29A3Q9BZD2 475 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 KIR3DX1Q9H7L2 352 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 LATS2Q9NRM7 1088 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 SAE1Q9UBE0 346 aaPredicted RBP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 SLC24A2Q9UI40 661 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 LCMT1Q9UIC8 334 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 G3BP2Q9UN86 482 aaKnown RBP16.53■□□□□ 0.24
TOP3B-217ENST00000489581 BTRCQ9Y297 605 aa16.53■□□□□ 0.24
TOP3B-217ENST00000489581 PCSK5Q92824 1860 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 SSU72P8A0A1W2PR75 194 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 SLC9B1P1A6NJY1 282 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.24
TOP3B-217ENST00000489581 KRT86O43790 486 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 KRT1P04264 644 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 GYPCP04921 128 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 NFKB1P19838 968 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 MSH3P20585 1137 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 CDH3P22223 829 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 AKT1P31749 480 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 VAV2P52735 878 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 ITGA9Q13797 1035 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 PTPRCAPQ14761 206 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 LONRF2Q1L5Z9 754 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 VSIG1Q86XK7 387 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 ZBTB2Q8N680 514 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 TMEM102Q8N9M5 508 aaPredicted RBP16.52■□□□□ 0.24
TOP3B-217ENST00000489581 OR4E2Q8NGC2 313 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 C19orf60Q96EN9 201 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 GPR83Q9NYM4 423 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 PKP3Q9Y446 797 aa16.52■□□□□ 0.24
TOP3B-217ENST00000489581 SVILO95425 2214 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 MGAT4DA6NG13 374 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 TMEM150CB9EJG8 249 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 POLBP06746 335 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 CAPN1P07384 714 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 TNNT1P13805 278 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 RORAP35398 523 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-217ENST00000489581 WASHC5Q12768 1159 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 ATP1A4Q13733 1029 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 KRT33BQ14525 404 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 GSE1Q14687 1217 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 PRKD1Q15139 912 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-217ENST00000489581 PTCHD3Q3KNS1 767 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 FAM198BQ6UWH4 519 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 MED25Q71SY5 747 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 MAMDC2Q7Z304 686 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-217ENST00000489581 LILRA3Q8N6C8 439 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-217ENST00000489581 OR1L3Q8NH93 324 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 SLC35G2Q8TBE7 412 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 ZFPM2Q8WW38 1151 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 PNPLA2Q96AD5 504 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 MRGPRX2Q96LB1 330 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 FANCEQ9HB96 536 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 HACD3Q9P035 362 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 ERRFI1Q9UJM3 462 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-217ENST00000489581 ACSL5Q9ULC5 683 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 CRYBG3Q68DQ2 2970 aa16.51■□□□□ 0.23
TOP3B-217ENST00000489581 CLDN1O95832 211 aa16.5■□□□□ 0.23
TOP3B-217ENST00000489581 SLC35G4P0C7Q5 338 aa16.5■□□□□ 0.23
TOP3B-217ENST00000489581 HLA-DPA1P20036 260 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms