RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CCL22O00626 93 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 UBFD1O14562 309 aaKnown RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 AIM2O14862 343 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 KPNA5O15131 536 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 RAD51BO15315 384 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SNAP91O60641 907 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SNX2O60749 519 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SUPT3HO75486 399 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 ECI2O75521 394 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 GJB3O75712 270 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 BCAS2O75934 225 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 STAMBPO95630 424 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 TSPAN12O95859 305 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 S100BP04271 92 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 JUNP05412 331 aaKnown RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PIRTP0C851 137 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PRR35P0CG20 571 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 ENO3P13929 434 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CEBPBP17676 345 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MSH3P20585 1137 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 DGKAP23743 735 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 FCARP24071 287 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 FMO4P31512 558 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SPAM1P38567 509 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 KCNC1P48547 511 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 HSPA13P48723 471 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CLCN7P51798 805 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 NFATC2Q13469 925 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 HTR4Q13639 388 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 BLMHQ13867 455 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CCNIQ14094 377 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 FLOT2Q14254 428 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PFKFB4Q16877 469 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 TTLL9Q3SXZ7 439 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 ZRANB3Q5FWF4 1079 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CTSL3PQ5NE16 218 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SAMD4BQ5PRF9 694 aaKnown RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 TXNDC8Q6A555 127 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PSAPL1Q6NUJ1 521 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 C8orf82Q6P1X6 216 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MACC1Q6ZN28 852 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 TPRG1Q6ZUI0 275 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 USP45Q70EL2 814 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 GPSM1Q86YR5 675 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PIANPQ8IYJ0 282 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MIER2Q8N344 545 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PDPRQ8NCN5 879 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 HCAR2Q8TDS4 363 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 TWIST2Q8WVJ9 160 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 N4BP2L2Q92802 583 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 RCN3Q96D15 328 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SCRN2Q96FV2 425 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 LRIG1Q96JA1 1093 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MAGEB10Q96LZ2 347 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 NSMCE3Q96MG7 304 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 ZSWIM3Q96MP5 696 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CATSPER2Q96P56 530 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 BTBD9Q96Q07 612 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MCCC1Q96RQ3 725 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SLC22A12Q96S37 553 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 VCXQ9H320 206 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 RDH14Q9HBH5 336 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MID1IP1Q9NPA3 183 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 C11orf16Q9NQ32 467 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 GID8Q9NWU2 228 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CACNA2D2Q9NY47 1150 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 CFAP97Q9P2B7 532 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 NFKBIL1Q9UBC1 381 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MUTYHQ9UIF7 546 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 PSMD13Q9UNM6 376 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 COL4A2P08572 1712 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 C15orf38-AP3S2A0A0A6YYH1 394 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 GLYATL1P3A0A0U1RQE8 302 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 TMEM233B4DJY2 109 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 WASH3PC4AMC7 463 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 UBXN8O00124 270 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 LEFTY2O00292 366 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 QSOX1O00391 747 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 SLC9A3R1O14745 358 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 BUD23O43709 281 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 NRP2O60462 931 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 SKAP2O75563 359 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CRCPO75575 148 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 PRAMEF1O95521 474 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 POP4O95707 220 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 OTCP00480 354 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CAPNS1P04632 268 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 RPSAP08865 295 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ENO2P09104 434 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ZNF30P17039 623 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CHRM3P20309 590 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 GPX3P22352 226 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ACRV1P26436 265 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 EEF1DP29692 281 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 NSG1P42857 185 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 MAPK9P45984 424 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CCR10P46092 362 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms