RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CHST10O43529 356 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 PGLSO95336 258 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 PGRP06401 933 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 MNDAP41218 407 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 PRKD1Q15139 912 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 RASSF6Q6ZTQ3 369 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 CCDC80Q76M96 950 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 BEND5Q7L4P6 421 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 PIWIL1Q96J94 861 aaKnown RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 TBC1D17Q9HA65 648 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 SLC7A8Q9UHI5 535 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 FBXW11Q9UKB1 542 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF510Q9Y2H8 683 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 MED27Q6P2C8 311 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 DRICH1Q6PGQ1 229 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 SVOPLQ8N434 492 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 DCAKDQ8WVC6 231 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 CDADC1Q9BWV3 514 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 SNX4O95219 450 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 HOXB6P17509 224 aaKnown RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 CCNFP41002 786 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 PSMD8P48556 350 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 SCRN3Q0VDG4 424 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 LRRC73Q5JTD7 316 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 RTL4Q6ZR62 310 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 KBTBD7Q8WVZ9 684 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 GTF2IRD1Q9UHL9 959 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 FBXW2Q9UKT8 454 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 SLC30A4O14863 429 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 IL1R2P27930 398 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 LILRA4P59901 499 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 ASTE1Q2TB18 679 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 LCN1P1Q5VSP4 162 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 CHST9Q7L1S5 443 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 CLEC4DQ8WXI8 215 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 TUBGCP5Q96RT8 1024 aa17.39■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF214Q9UL59 606 aaPredicted RBP17.39■□□□□ 0.37
NPHP4-209ENST00000489180 YJEFN3A6XGL0 299 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 EI24O14681 340 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 MAPK12P53778 367 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 RGS8P57771 180 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 BNC1Q01954 994 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 FCHO2Q0JRZ9 810 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ZDHHC20Q5W0Z9 365 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 GPR153Q6NV75 609 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 NAPRTQ6XQN6 538 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ZZZ3Q8IYH5 903 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 TSEN15Q8WW01 171 aaKnown RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF395Q9H8N7 513 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 POLR3BQ9NW08 1133 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 NT5EP21589 574 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 IGFBP4P22692 258 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 BCAP31P51572 246 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ATXN7L2Q5T6C5 722 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 TXNRD3NBQ6F5E7 133 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 FAAH2Q6GMR7 532 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 FAM210AQ96ND0 272 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ARL5CA6NH57 179 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 CLDN25C9JDP6 229 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 GRB14Q14449 540 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 FAM91A1Q658Y4 838 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 NAT8LQ8N9F0 302 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ZMIZ2Q8NF64 920 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 TBX10O75333 385 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 RAB25P57735 213 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 DAOAP59103 153 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 SULT2A1Q06520 285 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF155Q12901 538 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 CES5AQ6NT32 575 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 SMARCD3Q6STE5 483 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 USP30Q70CQ3 517 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 NEK7Q8TDX7 302 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 SLC13A3Q8WWT9 602 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF516Q92618 1163 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 EXO5Q9H790 373 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 PTTG2Q9NZH5 202 aa17.38■□□□□ 0.37
NPHP4-209ENST00000489180 RBM7Q9Y580 266 aaKnown RBP17.38■□□□□ 0.37
NPHP4-209ENST00000489180 CDH4P55283 916 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 NPY5RQ15761 445 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 CERS6Q6ZMG9 384 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 FAM110BQ8TC76 370 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 NSMCE3Q96MG7 304 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 MED28Q9H204 178 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TOR3AQ9H497 397 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 A0A075B6Q4 140 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 H6PDO95479 791 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 ADH1CP00326 375 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 ARFIP1P53367 373 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 PHYKPLQ8IUZ5 450 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 RELTQ969Z4 430 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 C1QTNF1Q9BXJ1 281 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TMEM27Q9HBJ8 222 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TRPS1Q9UHF7 1281 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 ZNF99A8MXY4 864 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-209ENST00000489180 PDLIM1O00151 329 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 ASGR1P07306 291 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 TFPIP10646 304 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 CKMT2P17540 419 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 GLUD2P49448 558 aa17.37■□□□□ 0.37
NPHP4-209ENST00000489180 GANABQ14697 944 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms