RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 E2F3O00716 465 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 AURKAO14965 403 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 KLHL41O60662 606 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 IPO13O94829 963 aaKnown RBP15.73■□□□□ 0.11
USP48-210ENST00000489108 CDH3P22223 829 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 ITGA3P26006 1051 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 HADHAP40939 763 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 ARSEP51690 589 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 ADCY2Q08462 1091 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 SLC10A2Q12908 348 aaPredicted RBP15.73■□□□□ 0.11
USP48-210ENST00000489108 ATP13A4Q4VNC1 1196 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 MLIPQ5VWP3 458 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 TMEM220Q6QAJ8 160 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 CARFQ8N187 725 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 CCNYQ8ND76 341 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 GRHL3Q8TE85 626 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 TM9SF4Q92544 642 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 COPG2Q9UBF2 871 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 SLC24A2Q9UI40 661 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 SERTAD3Q9UJW9 196 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 PADI2Q9Y2J8 665 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 MYO7BQ6PIF6 2116 aa15.73■□□□□ 0.11
USP48-210ENST00000489108 ITPR3Q14573 2671 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 MED13LQ71F56 2210 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 HEATR9A2RTY3 570 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 PEX12O00623 359 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ZNF749O43361 778 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 MYBL1P10243 752 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 AGXTP21549 392 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 PBLDP30039 288 aaPredicted RBP15.72■□□□□ 0.11
USP48-210ENST00000489108 PREPP48147 710 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 GBE1Q04446 702 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 DPYSL3Q14195 570 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 PCSK7Q16549 785 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 HIF1AQ16665 826 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 METRNLQ641Q3 311 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ZNF385CQ66K41 422 aaPredicted RBP15.72■□□□□ 0.11
USP48-210ENST00000489108 FJX1Q86VR8 437 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ANKRD20A12PQ8NF67 263 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 OR4E2Q8NGC2 313 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ZFPM2Q8WW38 1151 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 C12orf66Q96MD2 445 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 DPH2Q9BQC3 489 aaPredicted RBP15.72■□□□□ 0.11
USP48-210ENST00000489108 DHRS4Q9BTZ2 278 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 WWP1Q9H0M0 922 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 NUP62CLQ9H1M0 184 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 SYTL2Q9HCH5 934 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 C1GALT1Q9NS00 363 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 P4HTMQ9NXG6 502 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ITGB1BP2Q9UKP3 347 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 PTRH2Q9Y3E5 179 aaKnown RBP15.72■□□□□ 0.11
USP48-210ENST00000489108 SPO11Q9Y5K1 396 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 DNMT3AQ9Y6K1 912 aaPredicted RBP15.72■□□□□ 0.11
USP48-210ENST00000489108 ZFHX3Q15911 3703 aa15.72■□□□□ 0.11
USP48-210ENST00000489108 ANKRD12Q6UB98 2062 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 CNTRLQ7Z7A1 2325 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 DOCK10Q96BY6 2186 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 LRRC10BA6NIK2 292 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 OR2AG2A6NM03 316 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A9O60656 530 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 EDN3P14138 238 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A6P19224 532 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A1P22309 533 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A4P22310 534 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 SSR1P43307 286 aaKnown RBP15.71■□□□□ 0.11
USP48-210ENST00000489108 SOX8P57073 446 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 ZBTB17Q13105 803 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 ASIC2Q16515 512 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 NIPA2Q8N8Q9 360 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
USP48-210ENST00000489108 HDAC11Q96DB2 347 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 TRIM11Q96F44 468 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 LURAP1Q96LR2 239 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 WDR77Q9BQA1 342 aaPredicted RBP15.71■□□□□ 0.11
USP48-210ENST00000489108 CEP41Q9BYV8 373 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 XPO4Q9C0E2 1151 aaKnown RBP15.71■□□□□ 0.11
USP48-210ENST00000489108 ISCUQ9H1K1 167 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 KIR3DX1Q9H7L2 352 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A7Q9HAW7 530 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A10Q9HAW8 530 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 UGT1A8Q9HAW9 530 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 POMT2Q9UKY4 750 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 MYO6Q9UM54 1294 aa15.71■□□□□ 0.11
USP48-210ENST00000489108 NOVA2Q9UNW9 492 aaKnown RBP15.71■□□□□ 0.11
USP48-210ENST00000489108 A0A1B0GUH1 482 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 E7EQ34 232 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 IGHEP01854 428 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 STSP08842 583 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 CBSLP0DN79 551 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 ST6GAL1P15907 406 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 MX2P20592 715 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 CDK11BP21127 795 aaKnown RBP15.7■□□□□ 0.1
USP48-210ENST00000489108 CBSP35520 551 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 LMAN1P49257 510 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 FOXL2P58012 376 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 PRKAA1Q13131 559 aa15.7■□□□□ 0.1
USP48-210ENST00000489108 B4GALNT4Q76KP1 1039 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms