RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TTC9Q92623 222 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 NKD1Q969G9 470 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 SPRY4Q9C004 299 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 CASS4Q9NQ75 786 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 SLC2A6Q9UGQ3 507 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 DRG1Q9Y295 367 aaKnown RBP24.42■■□□□ 1.5
HMGN1-217ENST00000489072 CCDC162PA2VCL2 907 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 TOX3O15405 576 aaPredicted RBP24.41■■□□□ 1.5
HMGN1-217ENST00000489072 CEP104O60308 925 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 PRB1P04280 392 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 SLC35G4P0C7Q5 338 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 MSNP26038 577 aaKnown RBP24.41■■□□□ 1.5
HMGN1-217ENST00000489072 FOXN2P32314 431 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 SEPHS1P49903 392 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 CAPRIN2Q6IMN6 1127 aaKnown RBP24.41■■□□□ 1.5
HMGN1-217ENST00000489072 IRGCQ6NXR0 463 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 FAM92BQ6ZTR7 304 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 PRSS42Q7Z5A4 293 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 TEFMQ96QE5 360 aaKnown RBP24.41■■□□□ 1.5
HMGN1-217ENST00000489072 RAB33BQ9H082 229 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 ZNF768Q9H5H4 540 aaKnown RBP24.41■■□□□ 1.5
HMGN1-217ENST00000489072 ZKSCAN5Q9Y2L8 839 aa24.41■■□□□ 1.5
HMGN1-217ENST00000489072 C17orf113A0A1B0GUU1 675 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 HEATR9A2RTY3 570 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 NRDCO43847 1150 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 APRTP07741 180 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 KCNJ1P48048 391 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 KCTD19Q17RG1 926 aaPredicted RBP24.4■■□□□ 1.5
HMGN1-217ENST00000489072 CEACAM20Q6UY09 585 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 LSM14AQ8ND56 463 aaKnown RBP24.4■■□□□ 1.5
HMGN1-217ENST00000489072 ZDHHC12Q96GR4 267 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 ZNF778Q96MU6 729 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 RANBP9Q96S59 729 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 CCM2Q9BSQ5 444 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 COG4Q9H9E3 785 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 PILRAQ9UKJ1 303 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 PRSS21Q9Y6M0 314 aa24.4■■□□□ 1.5
HMGN1-217ENST00000489072 RASSF9O75901 435 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 GAS8O95995 478 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 SH3BP2P78314 561 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 PLCL1Q15111 1095 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 TSTD2Q5T7W7 516 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 CACHD1Q5VU97 1274 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 MAIP1Q8WWC4 291 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 KLHL6Q8WZ60 621 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 HDAC10Q969S8 669 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 OR52A5Q9H2C5 316 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 KIR3DX1Q9H7L2 352 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 GRPEL1Q9HAV7 217 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 SMARCAL1Q9NZC9 954 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 SLC24A2Q9UI40 661 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 PCDHGA4Q9Y5G9 962 aa24.39■■□□□ 1.49
HMGN1-217ENST00000489072 EIF4E1BA6NMX2 242 aaKnown RBP24.38■■□□□ 1.49
HMGN1-217ENST00000489072 TK2O00142 265 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 POLR1CO15160 346 aaPredicted RBP24.38■■□□□ 1.49
HMGN1-217ENST00000489072 RAD1O60671 282 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 ADRA1DP25100 572 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 ATP1A2P50993 1020 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 CACNA2D3Q8IZS8 1091 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 ZFPM2Q8WW38 1151 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 ZPBPQ9BS86 351 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 SEMA5BQ9P283 1151 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 RIMKLBQ9ULI2 386 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 TCAF1Q9Y4C2 921 aa24.38■■□□□ 1.49
HMGN1-217ENST00000489072 C1QL1O75973 258 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 GOT2P00505 430 aaKnown RBP24.37■■□□□ 1.49
HMGN1-217ENST00000489072 PDHA2P29803 388 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 ACVR1Q04771 509 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 FOXM1Q08050 763 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 ITIH4Q14624 930 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 GSE1Q14687 1217 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 TAF1BQ53T94 588 aaPredicted RBP24.37■■□□□ 1.49
HMGN1-217ENST00000489072 KLHL35Q6PF15 583 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 TIPARPQ7Z3E1 657 aaKnown RBP24.37■■□□□ 1.49
HMGN1-217ENST00000489072 PRELID2Q8N945 189 aa24.37■■□□□ 1.49
HMGN1-217ENST00000489072 EIF2B3Q9NR50 452 aaKnown RBP24.37■■□□□ 1.49
HMGN1-217ENST00000489072 COL6A6A6NMZ7 2263 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 IGHV5-51A0A0C4DH38 117 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 OR5K3A6NET4 321 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 AP2A2O94973 939 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 NSG1P42857 185 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 PREPP48147 710 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 LAMB3Q13751 1172 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 PACS1Q6VY07 963 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 ZNF534Q76KX8 674 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 GSTA5Q7RTV2 222 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 IL22RA1Q8N6P7 574 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 RNF31Q96EP0 1072 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 WBP1Q96G27 269 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 OR6C1Q96RD1 312 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 VPS37BQ9H9H4 285 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 TMEM184BQ9Y519 407 aaPredicted RBP24.36■■□□□ 1.49
HMGN1-217ENST00000489072 BAHCC1Q9P281 2608 aa24.36■■□□□ 1.49
HMGN1-217ENST00000489072 STK17BO94768 372 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 DLGAP3O95886 979 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 LIFP15018 202 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 NELFEP18615 380 aaKnown RBP24.35■■□□□ 1.49
HMGN1-217ENST00000489072 BASP1P80723 227 aaKnown RBP24.35■■□□□ 1.49
HMGN1-217ENST00000489072 COL9A2Q14055 689 aaPredicted RBP24.35■■□□□ 1.49
HMGN1-217ENST00000489072 AFTPHQ6ULP2 937 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms