RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HEATR9A2RTY3 570 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 CCDC162PA2VCL2 907 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 RPL22P35268 128 aaKnown RBP17.34■□□□□ 0.37
ITGB1-215ENST00000488494 SKIDA1Q1XH10 827 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 DRICH1Q6PGQ1 229 aaPredicted RBP17.34■□□□□ 0.37
ITGB1-215ENST00000488494 PCSK4Q6UW60 755 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 CEACAM20Q6UY09 585 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 CFAP206Q8IYR0 622 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 CLDN19Q8N6F1 224 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 OR13J1Q8NGT2 312 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 SLC39A7Q92504 469 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 ZDHHC12Q96GR4 267 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 COG4Q9H9E3 785 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 VPS37BQ9H9H4 285 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 GRPEL1Q9HAV7 217 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 SLC2A6Q9UGQ3 507 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 ZKSCAN5Q9Y2L8 839 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 PCDHGA4Q9Y5G9 962 aa17.34■□□□□ 0.37
ITGB1-215ENST00000488494 ATRXP46100 2492 aa17.33■□□□□ 0.37
ITGB1-215ENST00000488494 TOX3O15405 576 aaPredicted RBP17.33■□□□□ 0.36
ITGB1-215ENST00000488494 PRB1P04280 392 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 WT1P19544 449 aaPredicted RBP17.33■□□□□ 0.36
ITGB1-215ENST00000488494 PSMA3P25788 255 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 FOXN2P32314 431 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 FOXM1Q08050 763 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 GSE1Q14687 1217 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 TAF1BQ53T94 588 aaPredicted RBP17.33■□□□□ 0.36
ITGB1-215ENST00000488494 CACHD1Q5VU97 1274 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 KLHL35Q6PF15 583 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 AFTPHQ6ULP2 937 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 GSTA5Q7RTV2 222 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 MAIP1Q8WWC4 291 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 NKD1Q969G9 470 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 CCM2Q9BSQ5 444 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 KIR3DX1Q9H7L2 352 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 CASS4Q9NQ75 786 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 FBXO8Q9NRD0 319 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 SMARCAL1Q9NZC9 954 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 SLC24A2Q9UI40 661 aa17.33■□□□□ 0.36
ITGB1-215ENST00000488494 POLR1CO15160 346 aaPredicted RBP17.32■□□□□ 0.36
ITGB1-215ENST00000488494 RAD1O60671 282 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 PREPP48147 710 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 SH3BP2P78314 561 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 BASP1P80723 227 aaKnown RBP17.32■□□□□ 0.36
ITGB1-215ENST00000488494 LAMB3Q13751 1172 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 KCTD19Q17RG1 926 aaPredicted RBP17.32■□□□□ 0.36
ITGB1-215ENST00000488494 ZNF658BQ4V348 819 aaPredicted RBP17.32■□□□□ 0.36
ITGB1-215ENST00000488494 TSTD2Q5T7W7 516 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 CAPRIN2Q6IMN6 1127 aaKnown RBP17.32■□□□□ 0.36
ITGB1-215ENST00000488494 CACNA2D3Q8IZS8 1091 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 IL22RA1Q8N6P7 574 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 TTC9Q92623 222 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■■■■ 27.5
ITGB1-215ENST00000488494 RNF31Q96EP0 1072 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 RANBP9Q96S59 729 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 ZPBPQ9BS86 351 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 RAB33BQ9H082 229 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 EIF2B3Q9NR50 452 aaKnown RBP17.32■□□□□ 0.36
ITGB1-215ENST00000488494 EPHA6Q9UF33 1036 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 TCAF1Q9Y4C2 921 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 HEBP2Q9Y5Z4 205 aa17.32■□□□□ 0.36
ITGB1-215ENST00000488494 C17orf113A0A1B0GUU1 675 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 OR5K3A6NET4 321 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 STK17BO94768 372 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 AP2A2O94973 939 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 GOT2P00505 430 aaKnown RBP17.31■□□□□ 0.36
ITGB1-215ENST00000488494 KCNJ1P48048 391 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 KRT33BQ14525 404 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 ITIH4Q14624 930 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 PACS1Q6VY07 963 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 OOSP2Q86WS3 158 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 PPHLN1Q8NEY8 458 aaKnown RBP17.31■□□□□ 0.36
ITGB1-215ENST00000488494 HDAC10Q969S8 669 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 ZNF778Q96MU6 729 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 OR6C1Q96RD1 312 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 OR52A5Q9H2C5 316 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 PILRAQ9UKJ1 303 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 DRG1Q9Y295 367 aaKnown RBP17.31■□□□□ 0.36
ITGB1-215ENST00000488494 PRSS21Q9Y6M0 314 aa17.31■□□□□ 0.36
ITGB1-215ENST00000488494 TK2O00142 265 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 IFRD1O00458 451 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 LIFP15018 202 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 ADRA1DP25100 572 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 NDUFS1P28331 727 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 NSG1P42857 185 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 ARCN1P48444 511 aaKnown RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 ACVR1Q04771 509 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 COL9A2Q14055 689 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 DNTTIP2Q5QJE6 756 aaKnown RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 NLGN4XQ8N0W4 816 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 PRELID2Q8N945 189 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 ZSCAN1Q8NBB4 408 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 LSM14AQ8ND56 463 aaKnown RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 NLGN4YQ8NFZ3 816 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-215ENST00000488494 KLHL6Q8WZ60 621 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 ELMO2Q96JJ3 720 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 ULBP3Q9BZM4 244 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 COLEC10Q9Y6Z7 277 aa17.3■□□□□ 0.36
ITGB1-215ENST00000488494 IGHV5-51A0A0C4DH38 117 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms