RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CAPN9O14815 690 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 ATP2A1O14983 1001 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 ANKRD28O15084 1053 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 LINC01565O15544 149 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 SH3BP5O60239 455 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CAVIN2O95810 425 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 IGKV3-20P01619 116 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CRYAAP02489 173 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CORO1AP31146 461 aaKnown RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 HOXA13P31271 388 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 ZNF132P52740 706 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CTSCP53634 463 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 MED22Q15528 200 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 C18orf63Q68DL7 685 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 KLHL35Q6PF15 583 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 GFRALQ6UXV0 394 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 TOM1L2Q6ZVM7 507 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 IKBIPQ70UQ0 350 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CCDC190Q86UF4 302 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 ARID3BQ8IVW6 561 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 MAP7D3Q8IWC1 876 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 DCUN1D3Q8IWE4 304 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 SRBD1Q8N5C6 995 aaKnown RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 EMC1Q8N766 993 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 OR2AK2Q8NG84 335 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 OR13A1Q8NGR1 328 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 SPATA22Q8NHS9 363 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 KCNG4Q8TDN1 519 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 UTP15Q8TED0 518 aaKnown RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 DNASE2BQ8WZ79 361 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 GRAMD2BQ96HH9 432 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CMTM3Q96MX0 182 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 SEMA3CQ99985 751 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 SMARCAD1Q9H4L7 1026 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 POLR1BQ9H9Y6 1135 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 MAP3K20Q9NYL2 800 aaKnown RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 DBNLQ9UJU6 430 aaKnown RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 DLGAP4Q9Y2H0 992 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 ADAM18Q9Y3Q7 739 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 PIAS3Q9Y6X2 628 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 BRCA2P51587 3418 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 CHD8Q9HCK8 2581 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 SCN5AQ14524 2016 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 CPDO75976 1380 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 C4AP0C0L4 1744 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 C4BP0C0L5 1744 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 A0A0B4J293 547 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 A0A1W2PQF6 199 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 C1orf226A1L170 272 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 SMAD9O15198 467 aaKnown RBP4.19□□□□□ -1.74
ITGB1-214ENST00000488427 OGG1O15527 345 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 PDE9AO76083 593 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 DPEP1P16444 411 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 RGS2P41220 211 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 GALCP54803 685 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 CEBPZQ03701 1054 aaKnown RBP4.19□□□□□ -1.74
ITGB1-214ENST00000488427 ACVR2BQ13705 512 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 CCDC30Q5VVM6 783 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 ZDHHC20Q5W0Z9 365 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 ASB18Q6ZVZ8 466 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 NFE4Q86UQ8 179 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 TMEM219Q86XT9 240 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 ODF3L1Q8IXM7 274 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 PM20D2Q8IYS1 436 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 ZNF34Q8IZ26 560 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 OR8K5Q8NH50 307 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 HM13Q8TCT9 377 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 TRPC4APQ8TEL6 797 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 DUSP19Q8WTR2 217 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 SLC20A1Q8WUM9 679 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 SLC38A5Q8WUX1 472 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 PKP4Q99569 1192 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 TREX2Q9BQ50 279 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-214ENST00000488427 SEBOXQ9HB31 216 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-214ENST00000488427 CORO1CQ9ULV4 474 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-214ENST00000488427 ANKARQ7Z5J8 1434 aa4.19□□□□□ -1.74
ITGB1-214ENST00000488427 PLEKHH1Q9ULM0 1364 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 DLEC1Q9Y238 1755 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 IFITM10A6NMD0 228 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 A8MZ25 164 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 FAM90A26D6RGX4 464 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 WDHD1O75717 1129 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-214ENST00000488427 IGLV2-11P01706 119 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 PRSS1P07477 247 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 MYOD1P15172 320 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 TNFAIP3P21580 790 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 AHRP35869 848 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 DCAF7P61962 342 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 FAM76BQ5HYJ3 339 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 GKAP1Q5VSY0 366 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-214ENST00000488427 SNX30Q5VWJ9 437 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 JADE1Q6IE81 842 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 OR7E24Q6IFN5 339 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 FAM180BQ6P0A1 224 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 KCTD8Q6ZWB6 473 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 GALNT5Q7Z7M9 940 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 SDCCAG8Q86SQ7 713 aaPredicted RBP4.18□□□□□ -1.74
ITGB1-214ENST00000488427 SATL1Q86VE3 508 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 MCEMP1Q8IX19 187 aa4.18□□□□□ -1.74
ITGB1-214ENST00000488427 SLC5A8Q8N695 610 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms