RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-234	ENST00000487604	KCNE2	Q9Y6J6	123 aa		3.13	□□□□□ -1.91
RBM39-234	ENST00000487604	ATRX	P46100	2492 aa		3.13	□□□□□ -1.91
RBM39-234	ENST00000487604	IGKV6D-41	A0A0C4DH26	115 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	DNM1L	O00429	736 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	SRSF10	O75494	262 aa	Known RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	H1F0	P07305	194 aa	Known RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	SHC1	P29353	583 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	BSG	P35613	385 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	GALC	P54803	685 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	SLC8A3	P57103	927 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	LGALS3BP	Q08380	585 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	GAGE2B	Q13066	116 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	DHX8	Q14562	1220 aa	Known RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	TEAD2	Q15562	447 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	UGP2	Q16851	508 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	GAGE2E	Q4V326	116 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	TMEM198	Q66K66	360 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	GAGE2A	Q6NT46	116 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	KLC3	Q6P597	504 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	PSRC1	Q6PGN9	363 aa	Predicted RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	DOK6	Q6PKX4	331 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	GALNT13	Q8IUC8	556 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	FRMD1	Q8N878	549 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	TMEM178A	Q8NBL3	297 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	ETNPPL	Q8TBG4	499 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	ZNF300	Q96RE9	604 aa	Predicted RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	SLC22A12	Q96S37	553 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	DENND2D	Q9H6A0	471 aa	Predicted RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	SLA2	Q9H6Q3	261 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	OLFML3	Q9NRN5	406 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	RNF186	Q9NXI6	227 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	GAGE2D	Q9UEU5	116 aa		3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	LIMA1	Q9UHB6	759 aa	Known RBP	3.12	□□□□□ -1.91
RBM39-234	ENST00000487604	OGG1	O15527	345 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	ACP2	P11117	423 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	TLX1	P31314	330 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	RPS18	P62269	152 aa	Known RBP	3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	CDR2	Q01850	454 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	GOLGA8DP	Q0D2H9	430 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	RRS1	Q15050	365 aa	Known RBP	3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	TCTEX1D4	Q5JR98	221 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	CORO6	Q6QEF8	472 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	NGEF	Q8N5V2	710 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	OR2T11	Q8NH01	316 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	HSD17B8	Q92506	261 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	ZNF582	Q96NG8	517 aa	Predicted RBP	3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	PDCL3	Q9H2J4	239 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	UBN1	Q9NPG3	1134 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	RRP7BP	Q9NSQ0	103 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	SETD4	Q9NVD3	440 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	TAB2	Q9NYJ8	693 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	FLRT3	Q9NZU0	649 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	CSAG2	Q9Y5P2	127 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	ZHX2	Q9Y6X8	837 aa		3.11	□□□□□ -1.91
RBM39-234	ENST00000487604	SCAMP1	O15126	338 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	ATP6V0E1	O15342	81 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	CDC123	O75794	336 aa	Predicted RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	DUS4L	O95620	317 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	EIF2S1	P05198	315 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	ATP1A3	P13637	1013 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	PSMC4	P43686	418 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	RPS3A	P61247	264 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	HNRNPD	Q14103	355 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	EIF4A2	Q14240	407 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	TBCE	Q15813	527 aa	Predicted RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	DCAF10	Q5QP82	559 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	ACSM2B	Q68CK6	577 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	HPSE2	Q8WWQ2	592 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	DAZL	Q92904	295 aa	Known RBP	3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	C1orf74	Q96LT6	269 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	OR2A14	Q96R47	310 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	NUDCD1	Q96RS6	583 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	GAD1	Q99259	594 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	KLK13	Q9UKR3	277 aa		3.1	□□□□□ -1.91
RBM39-234	ENST00000487604	PI15	O43692	258 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	KHDRBS3	O75525	346 aa	Known RBP	3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	CLEC3B	P05452	202 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	CCR9	P51686	369 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	GPR17	Q13304	367 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	MED22	Q15528	200 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	RARS2	Q5T160	578 aa	Known RBP	3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	SMAP1	Q8IYB5	467 aa	Predicted RBP	3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	DCLK2	Q8N568	766 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	OR1J1	Q8NGS3	322 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	ARHGEF2	Q92974	986 aa	Known RBP	3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	ELMOD3	Q96FG2	381 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	MAGED4	Q96JG8	741 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	MYADM	Q96S97	322 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	HGH1	Q9BTY7	390 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	P2RY12	Q9H244	342 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	JMJD4	Q9H9V9	463 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	ACKR4	Q9NPB9	350 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	EHD2	Q9NZN4	543 aa		3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	SOS1	Q07889	1333 aa	Predicted RBP	3.09	□□□□□ -1.91
RBM39-234	ENST00000487604	AGRN	O00468	2067 aa		3.08	□□□□□ -1.92
RBM39-234	ENST00000487604	PLEKHD1	A6NEE1	506 aa		3.08	□□□□□ -1.92
RBM39-234	ENST00000487604	MSGN1	A6NI15	193 aa		3.08	□□□□□ -1.92
RBM39-234	ENST00000487604	LIPT2	A6NK58	231 aa		3.08	□□□□□ -1.92
RBM39-234	ENST00000487604	GPC4	O75487	556 aa		3.08	□□□□□ -1.92
RBM39-234	ENST00000487604	PIGN	O95427	931 aa		3.08	□□□□□ -1.92

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