RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RAD51BO15315 384 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 INPP4BO15327 924 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 PRAMEF12O95522 483 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 ALPIP09923 528 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 UGT1A6P19224 532 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 IL12AP29459 219 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 PTPN5P54829 565 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 ERVPABLB-1P60509 514 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 PRKG2Q13237 762 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 ATP6AP1LQ52LC2 224 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 Q6ZSR9 355 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 HID1Q8IV36 788 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 PROKR1Q8TCW9 393 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 OSCP1Q8WVF1 389 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 ACOX2Q99424 681 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 TM6SF2Q9BZW4 377 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 ATP13A3Q9H7F0 1226 aa25.7■■□□□ 1.71
HLA-C-208ENST00000487245 EVLQ9UI08 416 aaPredicted RBP25.7■■□□□ 1.71
HLA-C-208ENST00000487245 ZFC3H1O60293 1989 aaKnown RBP25.7■■□□□ 1.7
HLA-C-208ENST00000487245 K7ERQ8 282 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 SYNCRIPO60506 623 aaKnown RBP25.7■■□□□ 1.7
HLA-C-208ENST00000487245 PRAMEF1O95521 474 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 IGSF6O95976 241 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 SLC7A9P82251 487 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 TRIM60Q495X7 471 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 CBARPQ8N350 705 aaPredicted RBP25.7■■□□□ 1.7
HLA-C-208ENST00000487245 LRRC3Q9BY71 257 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 OAZ3Q9UMX2 235 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 SH3BP1Q9Y3L3 701 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 ASB1Q9Y576 335 aa25.7■■□□□ 1.7
HLA-C-208ENST00000487245 TRBV5-4A0A0C4DH59 114 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 FAM149AA5PLN7 773 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 ZNF701M0R085 212 aaPredicted RBP25.69■■□□□ 1.7
HLA-C-208ENST00000487245 MTHFD1P11586 935 aaKnown RBP25.69■■□□□ 1.7
HLA-C-208ENST00000487245 DGKAP23743 735 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 PCSK6P29122 969 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 ZXDBP98169 803 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 GPR33Q49SQ1 333 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 FAM151BQ6UXP7 276 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 GALNT13Q8IUC8 556 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 PAF1Q8N7H5 531 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 ZNF784Q8NCA9 323 aaPredicted RBP25.69■■□□□ 1.7
HLA-C-208ENST00000487245 FIBINQ8TAL6 211 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 ASB8Q9H765 288 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 RC3H2Q9HBD1 1191 aaKnown RBP25.69■■□□□ 1.7
HLA-C-208ENST00000487245 ABCB8Q9NUT2 735 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 PCDHB3Q9Y5E6 796 aa25.69■■□□□ 1.7
HLA-C-208ENST00000487245 C1orf232A0A0U1RR37 186 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 RNF103-CHMP3A0A140T963 221 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 KLHL33A6NCF5 533 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 IQCF5A8MTL0 148 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 SCAMP3O14828 347 aaKnown RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 NELFEP18615 380 aaKnown RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 NFATC2Q13469 925 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 CRY1Q16526 586 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 GRAMD4Q6IC98 578 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 TTC33Q6PID6 262 aaPredicted RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 RNF165Q6ZSG1 346 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 CDYL2Q8N8U2 506 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 FNDC5Q8NAU1 212 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 PDPRQ8NCN5 879 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 YTHDF1Q9BYJ9 559 aaKnown RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 CIPCQ9C0C6 399 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 RNF208Q9H0X6 261 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 MAGEL2Q9UJ55 1249 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 TBX21Q9UL17 535 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 KIAA1671Q9BY89 1806 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 A0A0U1RQS6 177 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 GAPDHSO14556 408 aaPredicted RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 SMAD6O43541 496 aaKnown RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 GLUD1P00367 558 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 LDLRP01130 860 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 HRH2P25021 359 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 GABRR2P28476 465 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 TIGD2Q4W5G0 525 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 C1orf53Q5VUE5 145 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 LETMD1Q6P1Q0 360 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 SCIMPQ6UWF3 145 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 LPCAT2Q7L5N7 544 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 SFRP1Q8N474 314 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 LEMD2Q8NC56 503 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 AUTS2Q8WXX7 1259 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 TMIGD2Q96BF3 282 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 C1orf50Q9BV19 199 aa25.68■■□□□ 1.7
HLA-C-208ENST00000487245 FAM126AQ9BYI3 521 aaPredicted RBP25.68■■□□□ 1.7
HLA-C-208ENST00000487245 TEX28O15482 410 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 CCL5P13501 91 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 PPM1AP35813 382 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 CAPGP40121 348 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 CDKN3Q16667 212 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 SMU1Q2TAY7 513 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 ZBED5Q49AG3 693 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 SBSNQ6UWP8 590 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 DLEU7Q6UYE1 221 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 OR52B6Q8NGF0 335 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 BPIFB1Q8TDL5 484 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 BIRC7Q96CA5 298 aa25.67■■□□□ 1.7
HLA-C-208ENST00000487245 INTS7Q9NVH2 962 aaKnown RBP25.67■■□□□ 1.7
HLA-C-208ENST00000487245 SMPD3Q9NY59 655 aaPredicted RBP25.67■■□□□ 1.7
HLA-C-208ENST00000487245 CFAP97Q9P2B7 532 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms