RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	CYP24A1	Q07973	514 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRPC3	Q13507	836 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CUL4A	Q13619	759 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZNF585B	Q52M93	769 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	C10orf76	Q5T2E6	689 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PAQR9	Q6ZVX9	377 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TMEM25	Q86YD3	366 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	BBS7	Q8IWZ6	715 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	C12orf56	Q8IXR9	622 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RAVER1	Q8IY67	606 aa	Known RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MINDY1	Q8N5J2	469 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PDILT	Q8N807	584 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRIML1	Q8N9V2	468 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	XXYLT1	Q8NBI6	393 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SCAMP5	Q8TAC9	235 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	IPO4	Q8TEX9	1081 aa	Known RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ADAMTS14	Q8WXS8	1223 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SLC25A28	Q96A46	364 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SYAP1	Q96A49	352 aa	Predicted RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CCDC127	Q96BQ5	260 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SMARCD1	Q96GM5	515 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HIC2	Q96JB3	615 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TNIP3	Q96KP6	325 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	XPO6	Q96QU8	1125 aa	Known RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	KCNK16	Q96T55	309 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GABRG3	Q99928	467 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GTPBP2	Q9BX10	602 aa	Known RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRIM9	Q9C026	710 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CUEDC2	Q9H467	287 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DPEP3	Q9H4B8	488 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FBXO44	Q9H4M3	255 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	UPF2	Q9HAU5	1272 aa	Known RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CSNK1G1	Q9HCP0	422 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	AGPAT3	Q9NRZ7	376 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MSRB1	Q9NZV6	116 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	WDR35	Q9P2L0	1181 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CGN	Q9P2M7	1197 aa	Known RBP	4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	KLK13	Q9UKR3	277 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	NFE2L3	Q9Y4A8	694 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	IGSF10	Q6WRI0	2623 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ATP8B3	O60423	1300 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	UBE4B	O95155	1302 aa		4.12	□□□□□ -1.75
SNRNP40-205	ENST00000486941	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PVALEF	A0A1B0GWK0	134 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FAM227A	F5H4B4	570 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RAB27B	O00194	218 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TAF4	O00268	1085 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	NPC1	O15118	1278 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CLIC2	O15247	247 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TLX3	O43711	291 aa	Predicted RBP	4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PPP6R2	O75170	966 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RPN1	P04843	607 aa	Known RBP	4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CISD3	P0C7P0	127 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GNS	P15586	552 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	BTF3	P20290	206 aa	Known RBP	4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SYT1	P21579	422 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ADRA1D	P25100	572 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TACR3	P29371	465 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ATP5C1	P36542	298 aa	Known RBP	4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CYP2J2	P51589	502 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZNF132	P52740	706 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CDH8	P55286	799 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FAM193A	P78312	1265 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CEBPZ	Q03701	1054 aa	Known RBP	4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GOLGA8F	Q08AF8	430 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GOLGA8DP	Q0D2H9	430 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GAB1	Q13480	694 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	STK38	Q15208	465 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	E2F5	Q15329	346 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CNN3	Q15417	329 aa	Known RBP	4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SGSM1	Q2NKQ1	1148 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PLEKHG6	Q3KR16	790 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZNF667	Q5HYK9	610 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	WDR45B	Q5MNZ6	344 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SYCP2L	Q5T4T6	812 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MANEAL	Q5VSG8	457 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FAM173B	Q6P4H8	233 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CLEC9A	Q6UXN8	241 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	UNC13D	Q70J99	1090 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GLRX5	Q86SX6	157 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	UNC93A	Q86WB7	457 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CRYBG2	Q8N1P7	616 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CHCHD4	Q8N4Q1	142 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DEFB119	Q8N690	84 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	IQUB	Q8NA54	791 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	LINC00301	Q8NCQ3	95 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZMIZ2	Q8NF64	920 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MPLKIP	Q8TAP9	179 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PARD3B	Q8TEW8	1205 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TMEM174	Q8WUU8	243 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SCFD1	Q8WVM8	642 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DNASE2B	Q8WZ79	361 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TAF4B	Q92750	862 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	WBP2	Q969T9	261 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZNF479	Q96JC4	524 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FCRL5	Q96RD9	977 aa		4.11	□□□□□ -1.75
SNRNP40-205	ENST00000486941	USP28	Q96RU2	1077 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms