RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 E5RI56 91 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 RECQL5O94762 991 aaPredicted RBP12.21□□□□□ -0.46
HSPG2-211ENST00000486901 AQP1P29972 269 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 HSPA7P48741 367 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 RENBPP51606 427 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.46
HSPG2-211ENST00000486901 RTL3Q8N8U3 475 aaKnown RBP12.21□□□□□ -0.46
HSPG2-211ENST00000486901 STAG3L4Q8TBR4 150 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 FUBP1Q96AE4 644 aaKnown RBP12.21□□□□□ -0.46
HSPG2-211ENST00000486901 DUS3LQ96G46 650 aaKnown RBP12.21□□□□□ -0.46
HSPG2-211ENST00000486901 DACH2Q96NX9 599 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 DOK1Q99704 481 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 CDH23Q9H251 3354 aa12.21□□□□□ -0.46
HSPG2-211ENST00000486901 ARL5CA6NH57 179 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 SLC1A7O00341 560 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 NBNO60934 754 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 RGRP47804 291 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 AASDHQ4L235 1098 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 MRNIPQ6NTE8 343 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 CYP20A1Q6UW02 462 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 LINGO4Q6UY18 593 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 HACD2Q6Y1H2 254 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 GPRIN3Q6ZVF9 776 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 USP51Q70EK9 711 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 AHSA2Q719I0 299 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 MICU2Q8IYU8 434 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 CLDN19Q8N6F1 224 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 POC5Q8NA72 575 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 LPCAT1Q8NF37 534 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 RORBQ92753 470 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 IMP4Q96G21 291 aaKnown RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TRMOQ9BU70 441 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TRIM54Q9BYV2 358 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 VNN3Q9NY84 501 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ST3GAL5Q9UNP4 418 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 KIAA0100Q14667 2235 aaKnown RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 LOC100130705A0A1B0GUX0 176 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TRIM64CA6NLI5 447 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TTC36A6NLP5 189 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 SEC24AO95486 1093 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ANGPTL1O95841 491 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 PABPC1P11940 636 aaKnown RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TTKP33981 857 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 NUDT6P53370 316 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TMBIM6P55061 237 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 HID1Q8IV36 788 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ATAD1Q8NBU5 361 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ADAMTS16Q8TE57 1224 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 NDEL1Q9GZM8 345 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 RERGLQ9H628 205 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FKBPLQ9UIM3 349 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FAM32AQ9Y421 112 aaKnown RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 MIA3Q5JRA6 1907 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FZD9O00144 591 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 PRMT5O14744 637 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 PGLSO95336 258 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 SERPINA1P01009 418 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FDXRP22570 491 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 GJA5P36382 358 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 ZXDBP98169 803 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 NPTX1Q15818 432 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 CTF1Q16619 201 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 INTS6LQ5JSJ4 861 aaKnown RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 KIAA0408Q6ZU52 694 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FRA10AC1Q70Z53 315 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 SCML4Q8N228 414 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FAM83FQ8NEG4 500 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-211ENST00000486901 GPRC5AQ8NFJ5 357 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 NPLOC4Q8TAT6 608 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 FKBP10Q96AY3 582 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 CDKN2AIPNLQ96HQ2 116 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 TSGA13Q96PP4 275 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 EGFL8Q99944 293 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 EHD1Q9H4M9 534 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 WDR37Q9Y2I8 494 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 PMF1-BGLAPU3KQ54 211 aa12.2□□□□□ -0.46
HSPG2-211ENST00000486901 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 CYP7B1O75881 506 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 ATXN1LP0C7T5 689 aaKnown RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 RAD51Q06609 339 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 MFSD10Q14728 455 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 FBXL22Q6P050 247 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 DLEU7Q6UYE1 221 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 GPSM1Q86YR5 675 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-211ENST00000486901 PDPRQ8NCN5 879 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 NETO1Q8TDF5 533 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 STON2Q8WXE9 905 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 NSMCE3Q96MG7 304 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF583Q96ND8 569 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF347Q96SE7 839 aa12.19□□□□□ -0.46
HSPG2-211ENST00000486901 MFSD1Q9H3U5 465 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms