RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 MILR1Q7Z6M3 343 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 DDX53Q86TM3 631 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 METTL3Q86U44 580 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 ZBTB2Q8N680 514 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 CLDN19Q8N6F1 224 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 MFSD2AQ8NA29 543 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 TMEM74Q96NL1 305 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 GRIP2Q9C0E4 1043 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 CRLS1Q9UJA2 301 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 ANKRD12Q6UB98 2062 aa17.69■□□□□ 0.42
PDLIM7-207ENST00000486828 INPP4BO15327 924 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 KATNA1O75449 491 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 GUCA1CO95843 209 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 IGSF6O95976 241 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 UMPSP11172 480 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 G6PDP11413 515 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 FCGR1AP12314 374 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ETS2P15036 469 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 UGT1A6P19224 532 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 UGT1A1P22309 533 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 UGT1A4P22310 534 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 HTR1EP28566 365 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 HMOX2P30519 316 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 UGT1A3P35503 534 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 UGT1A5P35504 534 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 SPAM1P38567 509 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CYP4F8P98187 520 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ABRAXAS2Q15018 415 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CHRNA6Q15825 494 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 FXNQ16595 210 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 SLC5A9Q2M3M2 681 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 GPR33Q49SQ1 333 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 MPPE1Q53F39 396 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 MPP7Q5T2T1 576 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 GPRC6AQ5T6X5 926 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 GRAMD4Q6IC98 578 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 SLC2A7Q6PXP3 512 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CYP20A1Q6UW02 462 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 MACC1Q6ZN28 852 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 HTR3DQ70Z44 454 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 EPHX4Q8IUS5 362 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 HID1Q8IV36 788 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CMTR2Q8IYT2 770 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CBARPQ8N350 705 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ISG20Q96AZ6 181 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CENPNQ96H22 339 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 HTATIP2Q9BUP3 242 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ACTL8Q9H568 366 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 VCX3AQ9NNX9 186 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 PNPLA3Q9NST1 481 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ABCB8Q9NUT2 735 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 SPG21Q9NZD8 308 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 KIAA1522Q9P206 1035 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CLEC4EQ9ULY5 219 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ZNF510Q9Y2H8 683 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 KANSL1LA0AUZ9 987 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ARHGAP10A1A4S6 786 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ARNTLO00327 626 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 IFRD1O00458 451 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ANKRD28O15084 1053 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 ZNF821O75541 412 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 NCK1P16333 377 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 MSH3P20585 1137 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 GABRR2P28476 465 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CCT8P50990 548 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 NR1H2P55055 460 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 AP5B1Q2VPB7 878 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 RBM44Q6ZP01 1051 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 TPGS1Q6ZTW0 290 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 BBS7Q8IWZ6 715 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CBR4Q8N4T8 237 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 PAPD5Q8NDF8 572 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 TFAP2CQ92754 450 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 VWCEQ96DN2 955 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 TOX2Q96NM4 488 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 HBEGFQ99075 208 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 C9orf16Q9BUW7 83 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 LRRC3Q9BY71 257 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 RBM38Q9H0Z9 239 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 TNKS2Q9H2K2 1166 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CFAP97Q9P2B7 532 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 CCL27Q9Y4X3 112 aa17.68■□□□□ 0.42
PDLIM7-207ENST00000486828 FAM149AA5PLN7 773 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 VILLO15195 856 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 TPST1O60507 370 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 H6PDO95479 791 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 LAG3P18627 525 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 SERPINA4P29622 427 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 SH3BGRP55822 239 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 TLE2Q04725 743 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 ATP6AP1Q15904 470 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 PHKG1Q16816 387 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 PLEKHG6Q3KR16 790 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 HABP4Q5JVS0 413 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 SULT1C3Q6IMI6 304 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 KRT80Q6KB66 452 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 RNF165Q6ZSG1 346 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 TMCO2Q7Z6W1 182 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 ZSWIM9Q86XI8 627 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms