RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 AMER2Q8N7J2 671 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 GPR26Q8NDV2 337 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 SPATA3Q8NHX4 192 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 COG1Q8WTW3 980 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 ZNF599Q96NL3 588 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 PCDHB18PQ96TA0 734 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 SLC7A5P2Q9GIP4 190 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 EPS8L2Q9H6S3 715 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 NT5MQ9NPB1 228 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 SLC22A11Q9NSA0 550 aa14.73□□□□□ -0.05
U2AF1-211ENST00000486519 H3BMH7 237 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 FANCGO15287 622 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 IGHEP01854 428 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 PREPP48147 710 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 ZNF143P52747 638 aaPredicted RBP14.72□□□□□ -0.05
U2AF1-211ENST00000486519 SMSP52788 366 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 DSC2Q02487 901 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 MFAP5Q13361 173 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 ZNF569Q5MCW4 686 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 FAM182AQ5T1J6 154 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 CYP4V2Q6ZWL3 525 aaPredicted RBP14.72□□□□□ -0.05
U2AF1-211ENST00000486519 LPCAT1Q8NF37 534 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 PTERQ96BW5 349 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 SNRNP25Q9BV90 132 aaKnown RBP14.72□□□□□ -0.05
U2AF1-211ENST00000486519 SELENOOQ9BVL4 669 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 SPATA16Q9BXB7 569 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 VPS16Q9H269 839 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 FANCEQ9HB96 536 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 SAMSN1Q9NSI8 373 aaKnown RBP14.72□□□□□ -0.05
U2AF1-211ENST00000486519 DHCR7Q9UBM7 475 aaKnown RBP14.72□□□□□ -0.05
U2AF1-211ENST00000486519 SNRNP200O75643 2136 aaKnown RBP14.72□□□□□ -0.05
U2AF1-211ENST00000486519 GTF3C1Q12789 2109 aa14.72□□□□□ -0.05
U2AF1-211ENST00000486519 COL6A5A8TX70 2615 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 E7EQ34 232 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 SMC2O95347 1197 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 ESRRAP11474 423 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 CDH3P22223 829 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 MMP13P45452 471 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 EPHB1P54762 984 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 DPYSQ14117 519 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 KLHL35Q6PF15 583 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 KIRREL2Q6UWL6 708 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 ISLR2Q6UXK2 745 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 CDHR3Q6ZTQ4 885 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 TMEM200AQ86VY9 491 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 OOSP2Q86WS3 158 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 FAM20CQ8IXL6 584 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 CHDHQ8NE62 594 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 GLYATL1Q969I3 302 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 ARSGQ96EG1 525 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 THOC3Q96J01 351 aaKnown RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 MCEEQ96PE7 176 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 DPH2Q9BQC3 489 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 LHPPQ9H008 270 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 SPRTNQ9H040 489 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 NPDC1Q9NQX5 325 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 IMP3Q9NV31 184 aaKnown RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 IFT80Q9P2H3 777 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 GPN3Q9UHW5 284 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-211ENST00000486519 POMT2Q9UKY4 750 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 MEMO1Q9Y316 297 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 ZDHHC9Q9Y397 364 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 HS3ST3B1Q9Y662 390 aa14.71□□□□□ -0.05
U2AF1-211ENST00000486519 GTPBP10A4D1E9 387 aaKnown RBP14.7□□□□□ -0.06
U2AF1-211ENST00000486519 DAPK3O43293 454 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 IGFBP2P18065 325 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 HTR7P34969 479 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 TNFSF10P50591 281 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 ADAM8P78325 824 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 ADCY2Q08462 1091 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 NFE2L1Q14494 772 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 DEFB110Q30KQ9 67 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 ZNF653Q96CK0 615 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 LYSMD1Q96S90 227 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 INSM2Q96T92 566 aaPredicted RBP14.7□□□□□ -0.06
U2AF1-211ENST00000486519 NAA15Q9BXJ9 866 aaKnown RBP14.7□□□□□ -0.06
U2AF1-211ENST00000486519 TDRD1Q9BXT4 1180 aaKnown RBP14.7□□□□□ -0.06
U2AF1-211ENST00000486519 PKD2L2Q9NZM6 624 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 CWC15Q9P013 229 aaKnown RBP14.7□□□□□ -0.06
U2AF1-211ENST00000486519 NDOR1Q9UHB4 597 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 PCSK1NQ9UHG2 260 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 SLC24A2Q9UI40 661 aa14.7□□□□□ -0.06
U2AF1-211ENST00000486519 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 SIGLEC16A6NMB1 481 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 BIN1O00499 593 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 SLCO2B1O94956 709 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 MTHFD1P11586 935 aaKnown RBP14.69□□□□□ -0.06
U2AF1-211ENST00000486519 UNGP13051 313 aaPredicted RBP14.69□□□□□ -0.06
U2AF1-211ENST00000486519 ITGAXP20702 1163 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 HALP42357 657 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 AIF1P55008 147 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 GSCP56915 257 aaPredicted RBP14.69□□□□□ -0.06
U2AF1-211ENST00000486519 QPCTQ16769 361 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 LONRF1Q17RB8 773 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 PPP6R3Q5H9R7 873 aaPredicted RBP14.69□□□□□ -0.06
U2AF1-211ENST00000486519 C3P1Q6ZMU1 363 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 SHISA6Q6ZSJ9 500 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 C3orf20Q8ND61 904 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms