RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 RPE65Q16518 533 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 WHAMMP3Q1A5X7 153 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 TFDP3Q5H9I0 405 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 GPRC6AQ5T6X5 926 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 DUS1LQ6P1R4 473 aaKnown RBP12.36□□□□□ -0.43
PRAME-212ENST00000485532 GLT6D1Q7Z4J2 308 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 AMZ2Q86W34 360 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 APOBEC4Q8WW27 367 aaKnown RBP12.36□□□□□ -0.43
PRAME-212ENST00000485532 P3H4Q92791 437 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 STAMBPL1Q96FJ0 436 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 QKIQ96PU8 341 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRAME-212ENST00000485532 FCRL5Q96RD9 977 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 KCTD3Q9Y597 815 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 NBASA2RRP1 2371 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
PRAME-212ENST00000485532 DOPEY2Q9Y3R5 2298 aa12.36□□□□□ -0.43
PRAME-212ENST00000485532 TNRC6AQ8NDV7 1962 aaKnown RBP12.36□□□□□ -0.43
PRAME-212ENST00000485532 GLYATL1P3A0A0U1RQE8 302 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 TOX3O15405 576 aaPredicted RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 FGF5P12034 268 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 VCLP18206 1134 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 NELFEP18615 380 aaKnown RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 HALP42357 657 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 DMPKQ09013 629 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 IL11RAQ14626 422 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 SIX1Q15475 284 aaPredicted RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 LDLRAP1Q5SW96 308 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 PWWP2BQ6NUJ5 590 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 FAM199XQ6PEV8 388 aaPredicted RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 BBS12Q6ZW61 710 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 BZW1Q7L1Q6 419 aaKnown RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 DDHD1Q8NEL9 900 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 BRSK1Q8TDC3 778 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 CT55Q8WUE5 264 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 ZDHHC12Q96GR4 267 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
PRAME-212ENST00000485532 MAP3K3Q99759 626 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 FAM118BQ9BPY3 351 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 APOL2Q9BQE5 337 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 FICDQ9BVA6 458 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 TRABDQ9H4I3 376 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 RNF14Q9UBS8 474 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 EPHA6Q9UF33 1036 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 RSPH14Q9UHP6 348 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 KCNMB2Q9Y691 235 aa12.35□□□□□ -0.43
PRAME-212ENST00000485532 CDC14CA4D256 554 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 EPOP01588 193 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 NTRK1P04629 796 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 EBLN1P0CF75 366 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 RBL1P28749 1068 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 AKT1P31749 480 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 CASRP41180 1078 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 PAFAH1B1P43034 410 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 ARCN1P48444 511 aaKnown RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 MC1RQ01726 317 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 TUBB3Q13509 450 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 PLCL1Q15111 1095 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 LONRF2Q1L5Z9 754 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 LACTB2Q53H82 288 aaPredicted RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 FNBP1LQ5T0N5 605 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 CCDC181Q5TID7 509 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 PPP1R3BQ86XI6 285 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 LILRA3Q8N6C8 439 aaPredicted RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 SIDT2Q8NBJ9 832 aaKnown RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 PPM1MQ96MI6 270 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 INSM2Q96T92 566 aaPredicted RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 NRTNQ99748 197 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 FSD1LQ9BXM9 530 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 RAB33BQ9H082 229 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 WWP1Q9H0M0 922 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 IMP3Q9NV31 184 aaKnown RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 HACD3Q9P035 362 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 R3HDM2Q9Y2K5 976 aaKnown RBP12.34□□□□□ -0.43
PRAME-212ENST00000485532 PKP3Q9Y446 797 aa12.34□□□□□ -0.43
PRAME-212ENST00000485532 H7C0C1 242 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 STX7O15400 261 aaKnown RBP12.33□□□□□ -0.44
PRAME-212ENST00000485532 MTSS1O43312 755 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 SGTAO43765 313 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 TJP3O95049 919 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 PRAMEF1O95521 474 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 MTHFD1P11586 935 aaKnown RBP12.33□□□□□ -0.44
PRAME-212ENST00000485532 HLA-DPA1P20036 260 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 MSH3P20585 1137 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 TNNT3P45378 269 aaPredicted RBP12.33□□□□□ -0.44
PRAME-212ENST00000485532 ATP5OP48047 213 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 RPS18P62269 152 aaKnown RBP12.33□□□□□ -0.44
PRAME-212ENST00000485532 FOXK1P85037 733 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
PRAME-212ENST00000485532 MPP3Q13368 585 aa12.33□□□□□ -0.44
PRAME-212ENST00000485532 DNASE1L3Q13609 305 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms